Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373726
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Entry
139373726 CDS
T10872
Name
(RefSeq) tax1-binding protein 1 homolog A-like isoform X1
KO
K21347
Tax1-binding protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139373726
04137 Mitophagy - animal
139373726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139373726
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139373726
Membrane trafficking [BR:
ocla04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
139373726
Xenophagy
Cargo receptors
139373726
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
139373726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
Fez1
Motif
Other DBs
NCBI-GeneID:
139373726
NCBI-ProteinID:
XP_070970730
LinkDB
All DBs
Position
18:55829245..55868988
Genome browser
AA seq
931 aa
AA seq
DB search
MMSSFQVVGSLPSSVIGVMETSNFAHVIFQNVGKSFLPQEALECCYTLTSYITPNPKDWV
GIFKVGWNTARDYYTFLWSPMPQDYQPGSTVHRAVVFQGYYVPKSDGEFYQFCYVTHTGD
IRGASTPFLFRPATPTEDCLTVTEDDSNSDILVVTTKSSVLEQRVEEAQQERRELLKTMH
HLQEEKQQLQEEHRRLHREREQERETCSLLRTHNQELLRSSQGLSEEREEVRRRLQEATD
RVRQLEEDLLGVTQRGLQKETELDCLRDRLKKLTADKDTLETQLKNEKDERDLYKVHLRS
TELENTKLSAELQMLKAVELNREVTIAQFQEELDRLRACVTQKECLEKELHTHAVDKAEM
GRLREKLRQAEEQLQASRQQAAMLVSELRDSASARDRTMTELYRARLEVDALRASLADAQ
AECRRMETQLDRMRTTSQQEVGVGTSSEGGCVVSEAEAELQREVEELKLRLHMAAEHYKE
KYRECQRLRRQVAKLSEAQGESKRNAATETTQEPLTPSPESPTAGNLAAAVLRGDTERPA
VPNRSYKDREHTYTNTFSGMETMRVGEKEWKGRNGDEREVSGGEEGKEEGSVEEERKKDR
SVGGEFMSMKMESWVEVENERRSAEEVDERRSVEEVEKEQTRSVEEELARMEEKWAEQCA
INETLKQRLANEEERFRIQMAERAIEVTELKESLAQALREKDQLKEELHQCQDRQREQEA
EGQGSEVKQPVLLRYPLPYPQDPSPPPLVPQRPAELQYGNPYSTDNTRDGADGALSPEQM
PRPPPEAPGACAPPATPPTPGAGWEREVVCIQPSSRSMSPPDGLEHPPEEPRNVGDGEQP
ACNHQSSSRRNDNRSSFCFDPSNEVHKRCPLCEVIFPPHFEQRSFEQHVESHWKVCPVCS
EQFPLDCHQQLFQKHVLTHFDGHVLNFDNME
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatcgttccaggtggtgggctctttgcccagcagtgtcatcggcgtcatggaa
acatcaaactttgcccatgtcatcttccagaacgttgggaagagcttcctgccccaggag
gcactggagtgttgctacaccctcacctcgtacatcacccccaaccccaaagactgggtg
ggaatatttaaggtgggttggaacacagcgagggattactacactttcctgtggtctccc
atgccgcaagactaccaacctggaagcaccgtacacagggctgtggtgttccaagggtac
tatgttcccaagagtgacggggagttttatcagttctgttacgtcacacacacgggtgac
atcagaggcgccagcacacctttcctgtttcgcccggccacgcccaccgaggactgtctt
accgtaaccgaggatgacagcaactcagacattctggtggtgaccaccaagagcagtgtg
ctggagcagcgtgtagaggaagcgcagcaggagcgcagggagctgttgaagaccatgcac
cacctgcaagaggagaagcagcagctgcaggaggagcacaggaggctgcacagagagaga
gagcaggagagggagacctgcagcttgctacgcacacacaaccaggagctgctacgctcc
tcccagggcctgtcagaggagagggaggaggtgaggaggagactgcaggaggccacagac
cgggtcagacagctggaggaggacctactgggagtcacacagagagggctgcagaaagag
accgaactggactgtctgagagacaggttaaagaagctgacagcagataaagacactctg
gagacccaactgaagaatgagaaggacgagagggacctttacaaggtccacctgcgtagc
acggagctagagaacactaagctgagtgcagagctgcagatgctgaaggctgtggagctc
aacagagaggtgaccatcgctcagttccaagaagaactggacaggctccgagcctgcgtc
actcagaaagaatgcctggagaaagagctgcacacacacgctgtcgacaaggctgagatg
ggtcgtctgagggagaagcttcgccaggccgaggagcagctccaggcgtctcgccagcag
gccgccatgttggtgtcagagctccgcgactcagcgagtgcccgcgaccgcaccatgacc
gagctgtaccgcgcccgcctggaggtcgacgccctccgcgccagcctggccgatgcccag
gccgagtgccggcgaatggagacgcagctggaccgcatgaggaccacctcccaacaggaa
gtgggtgtggggacctccagtgagggggggtgtgtggtgtctgaggcggaggctgagcta
cagagagaagtggaggagctgaagctgcgtctccacatggccgctgagcactacaaggag
aagtacagggagtgtcagcgactccgcaggcaggtggccaagctcagcgaggcccagggg
gagtcaaagagaaacgctgctactgagacgacacaggagccactgacacccagtccagag
tcacctacagcaggcaatctggctgcagctgtgctgagaggagacactgagaggcctgct
gtccctaaccgcagttacaaagacagggaacacacatacaccaatacattctcaggcatg
gaaaccatgagagtaggggagaaggagtggaaggggagaaatggggacgagagggaagtg
agtggaggagaggaagggaaagaagaggggagtgtggaagaggagaggaagaaggacagg
agtgtaggaggtgagttcatgagcatgaagatggagagttgggtggaggtggagaatgag
aggaggagtgctgaagaggtggatgagaggaggagtgtggaggaggtagagaaagagcag
actcgttcggtggaggaggagctggcgaggatggaggagaagtgggcggagcagtgtgct
atcaacgaaacgctcaaacagagactggccaatgaggaggagcgattcaggatacagatg
gcagagagggccatagaggtgacagagctgaaggagagtctggctcaggccctcagagag
aaggaccaactcaaggaggagctgcatcagtgtcaggaccgacagagggagcaggaggct
gagggtcaagggtcagaggtcaaacagcctgtgttgctacgctaccccctgccctacccc
caggacccctccccaccccccctggtaccccagagacctgcagaattgcagtacgggaac
ccctactccaccgacaacactcgagacggggcagacggtgccctgtcccctgagcagatg
ccccgcccccctcccgaggcccctggtgcatgcgcccctccggccacccccccgacccct
ggtgcaggctgggagagagaggtggtctgcatccagccctcctcgcgaagcatgagcccc
cccgacggactggagcacccccccgaggagccacgcaacgtcggtgatggggagcagcct
gcctgcaatcatcagtccagcagcagacgcaacgacaacaggagcagcttctgttttgac
cccagtaatgaagtccacaagcgctgtccgttgtgcgaggtgatcttcccgccccacttt
gagcagcgtagctttgagcagcacgtggagagccactggaaggtgtgtcccgtgtgctct
gagcagttccccctcgattgccatcagcagctcttccagaagcacgtgctcacacacttt
gatggccatgtgctaaacttcgacaacatggagtag
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