Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373745
Help
Entry
139373745 CDS
T10872
Name
(RefSeq) shugoshin 1 isoform X1
KO
K11580
shugoshin-like 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139373745
04114 Oocyte meiosis
139373745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139373745
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
Shugoshin
139373745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Shugoshin_C
Dehydrin
Motif
Other DBs
NCBI-GeneID:
139373745
NCBI-ProteinID:
XP_070970773
LinkDB
All DBs
Position
18:complement(56808804..56819008)
Genome browser
AA seq
775 aa
AA seq
DB search
MARERGQKKSFQQSLGDIKEKMIEKRNKRLASASAGNRGRSKRINRTSAGNVKPIILKNV
QINNKALALALQAEKEKVRQANGIILQMKREQQALFLHLLMLKKRLKDQEAQASNVQTGP
AQLLAELPNPVDTSRRIQSQAALEDPVKDEAPLSPISSEPQFSKGVGQSESDGQVALPKT
VAVRRRRVEGRGRRSEHVRKGRRSSFYEQNHSASPESLIQKKTEVVMESLVLNARRGQNN
IQEVKMERGNPIGSEEFQQHFTPEPPAKPAYQQQQPRNKPKQAHPPWPKPELSARKQERG
LKPDRPPLKKPWETSKPRARSKSRDRSATRSRTGVASAASLNTSLNTSQGFNDTFDFDCE
DGVHLTPFKGSGPKDNPRDTPIQEVERKQNPKRTLSSSESSSSSSSESEDSPYVPQKRKR
RSPRDRAKPALALRTRGRPCKAATDKENGPPSKPELLHATRMEVCSTPVVLDKQLKEEPE
RSQSSIWIQPLSLVAMDVALETSLSESEGSPYVPKSRKTKKVRKTQGHPEQAKPTPTRRG
RPYKAARDKENVPPPKRQLSRVTRVEASPTAEPAEVPETEVQFPETPGSVFVDSPGPMAE
QGLEGHPEQHRQDKEEALLPVTPGVEEEMMRIGNVLSGFRDSPRESPGIPTSSTPQNHIS
HIPKTSKRTGGLSVRTGRGFSLSDVTNLTPAAYRKFSLKSSRPSDRCSTPVPGRKRRSTM
TVDYKEPSLHAKLRRGDRFTDTKFLLSPVFKQKPRKSVKTRLSLEKYNESFVGCR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggaacggggccagaagaagtctttccagcaaagcctgggtgacatcaaggaa
aagatgattgagaagaggaacaaacgcctggcaagcgcctctgcaggcaacaggggacgg
tccaaaaggatcaacagaaccagtgcgggcaacgtgaagccaattatcctgaagaacgtg
cagatcaataacaaagccctggctctggccctgcaggcagagaaggagaaggtgaggcag
gccaatggtatcatcctacagatgaagagggagcagcaggccctcttcctccacctcctc
atgctcaagaagaggctcaaagatcaggaggcgcaggccagtaatgtacagactggacct
gcacagctccttgctgaactaccaaatccagtggacacctccaggagaattcaaagccaa
gctgctctggaagatcctgtgaaggacgaagctccactctcacccatcagctcagagcct
cagttttctaaaggcgtgggacaaagcgaaagtgacgggcaagtggcgttgccaaagaca
gtggctgtgagacgtcgccgggtggaaggcagagggaggcgatctgagcatgtgcggaaa
gggcgccgttcctcgttctatgagcagaaccacagcgcctctccagaatctctcatacag
aaaaagactgaggtcgtaatggagagcctggttctaaacgccaggagaggccagaacaac
atacaggaagtgaagatggagagaggcaatccgattggctcagaggagttccagcagcac
ttcaccccagagcccccggctaaaccagcatatcaacagcagcaaccccggaacaaacca
aaacaggcccatccaccgtggcctaagcccgaactgtctgcacgcaagcaagagaggggc
ctcaaaccggaccgcccccctctgaagaaaccctgggagacctctaaacccagagcccgg
tccaagagccgggaccgctcagccacacggtccagaaccggggtggcctctgctgcatct
ctcaacacctccctcaacacatctcagggattcaatgacacttttgatttcgactgcgag
gacggggtacacctcacccccttcaagggtagcggacccaaggataacccccgagacaca
cccatacaggaggtggagaggaaacagaacccgaagaggactctgtcgtcatctgagtct
agttcatcttcgtcttctgagtcagaagacagcccctacgttcctcagaaacggaagagg
cggagcccccgggaccgggccaagcctgccctcgctcttagaaccagaggtcgaccctgc
aaagcagctacagacaaggagaacggccccccatccaaaccagagttgttacatgcaacc
agaatggaggtatgttccacccctgtggtccttgacaaacaactcaaggaggaaccagaa
aggagccagagctcgatttggatacagccgttgtctctggttgccatggatgttgcctta
gagaccagcttgtctgagtcagagggtagtccctacgttcctaaaagccgaaagacaaaa
aaagtacgaaagacacagggccacccagagcaggccaagcccacccccactcgcagggga
cggccctataaagcagccagagacaaggagaacgtcccccctcctaaacgacagttgtca
cgtgtcaccagagtagaggccagtcccacagctgagcccgctgaggtccctgagacagaa
gtccaattcccagaaacacctgggagtgtctttgttgacagtcctggtccaatggcagag
cagggtcttgagggccacccagagcaacacagacaagataaagaggaggctctgcttcct
gtcactccaggggtggaggaggagatgatgaggatcggcaatgtcctgtctggtttcagg
gactccccccgtgagtctcctgggataccgaccagcagcaccccccagaaccacatctca
cacatccccaaaacaagcaagaggacaggtgggcttagtgtcaggactgggcggggcttc
agtctgagtgatgtgaccaatcttacccctgcagcctatcggaagttctctttaaagagc
tcccgcccttcagaccgatgttccacccctgtccccggccgcaagaggcggtccacgatg
acagtggactacaaagagccatcgctgcacgcgaaactgagacgtggagacaggttcaca
gacaccaagttcctcctctctcccgtcttcaaacagaaacccaggaagtccgtgaagact
cggctgtcgttggagaaatacaacgagtcatttgtgggatgtcgctga
DBGET
integrated database retrieval system
