Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373763
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Entry
139373763 CDS
T10872
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 2
KO
K09099
aryl hydrocarbon receptor nuclear translocator-like protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139373763
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139373763
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
bHLH_INO2
Per3-like_PAS-A
bHLH_SAC51
PAS_2
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
139373763
NCBI-ProteinID:
XP_070970836
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Position
2:75795031..75830810
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AA seq
646 aa
AA seq
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MGNYANVSMIGQSSSAPYPKLGDVLVEENQSHSVSLPSLMTPTSAAGMTSGMELPRKRKG
SMDMEIKSASNLVADMKDEEDRSEGEDSQAKIKCFREPHSQIEKRRRDKMNNLIDELSAM
IPTCNPMSRKLDKLTVLRMAVQHLKSLKGSTCSFAEANYKPSFLPDDELKHLILKAADGF
LFVVGCDRGKIVFVSESINKTLNYSQTELIGQSLFDYIHPKDMGKVKEQLSASELYPRER
LIDAKTGLQVQADLPVGAARLCPGARRSFFCRMKYHKISVKQEDKEFQSSTSKKKESEKY
CTVHCTGYIRSWPTSQLGEEGGEGETDKDSSHFSCLVAVGRVHLHAVSLVNGANEVLVKA
TEFVTRYAMDGKFTFVDQRATTVLGYLPQELLGTSCYEYFHQDDLPHLAERHRKVLRSKE
KIETHCYKFKTKHGSFVTLQSRMFSFINPWTKEVEYIVSTNTVMSSDHSPTDRSGDKAEP
SSNSKASEDDGNKSLPIIPGISSASSTMIYAGSIGTQIANELLDYNRMNSSPSSGNVSPF
TVLKDKSPLQLTLSSSSVPNGEVADLEMPGKSSSEEGEQQELKRPQFPAGESLMVETSQL
DMENMMDPGLGGLSNDEAAMAVIMSLLETDADLGEAVVMDEINWSL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggggaactatgcaaacgtctcaatgattggccaaagctcctctgcgccctatccaaaa
ctaggggatgtgttggtggaggaaaaccaaagccattctgtctctctgcccagcttgatg
acccccacctcagccgctggcatgacctcaggaatggaactgccccggaaacgcaaggga
agcatggacatggaaatcaaatcagcctccaatctggttgcagatatgaaagatgaagaa
gaccgatctgaaggggaggactctcaggctaaaatcaaatgcttcagggaacctcacagc
cagattgagaagcggcgccgggacaagatgaataatctgatcgacgagctgtcagccatg
attcccacctgtaaccccatgtcccgcaagttggacaaactcaccgtgctcaggatggct
gtgcagcacctcaaatccctcaaaggttccacctgttcctttgctgaagccaattataag
ccttcattcctccctgatgacgagctcaaacacctcattctcaaggctgctgacgggttc
ctgttcgtagtgggttgtgatcgcggaaaaatagtctttgtctcagagtccatcaacaag
acactgaattacagccagacggaactgattggacagagtctctttgactacattcaccca
aaggacatggggaaagtaaaggagcagctctcagcttctgagttatatccccgcgagaga
ctaatagatgccaaaacgggcctgcaggtccaggctgacctcccggtcggagcagctcgg
ctgtgtccgggcgcgcgacgctccttcttctgccgcatgaagtaccacaagatctcagtc
aaacaggaggacaaggaattccagtccagcacatcgaaaaagaaagagtctgagaagtac
tgcactgtccactgcacaggctacattcgcagctggcccaccagtcagctgggggaggag
gggggtgagggggagactgacaaggacagctcccacttcagctgcctggtggccgtgggc
cgtgtccacctccacgccgtctctcttgtcaacggggccaacgaggtcctggtcaaagca
acggagttcgtcacgcgctacgccatggatggcaagttcaccttcgtcgaccaacgagcc
accactgtcctaggatacttaccccaggagctgcttggaacgtcatgctacgaatacttc
catcaagatgacttgccacatttagcagaacgacatcgaaaagtgctgcggagtaaagag
aaaatagagacgcattgctacaaattcaaaacgaaacatggctcttttgtcacactacaa
agtcggatgtttagtttcataaatccctggaccaaagaagtagaatacatagtgtcaacc
aatactgtcatgtccagtgaccacagtccaacagacagatctggggacaaagcagaaccg
tcaagtaattccaaggcttcagaagacgatggcaataagtctcttcccatcatcccgggg
atctccagtgcttccagtaccatgatctatgcagggagcatcgggacccagatcgctaat
gagctgctggactacaacaggatgaactcgtccccatccagcggtaatgtcagccccttc
actgtgctgaaggacaagtctcctctgcaacttacactgtccagcagcagcgtgccaaat
ggagaggtggcagacctagagatgccagggaagtccagttcagaggaaggagaacaacaa
gaactcaaaagaccacaattccctgcaggagaatcactcatggtggaaacttcccagctg
gatatggagaatatgatggaccctggcctgggaggccttagtaatgacgaggcggccatg
gcagtgattatgagcctgctggagacggacgccgatctgggcgaggccgtggtcatggat
gagatcaactggtccctctga
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