Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373770
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Entry
139373770 CDS
T10872
Name
(RefSeq) protein argonaute-2 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139373770
03036 Chromosome and associated proteins [BR:
ocla03036
]
139373770
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139373770
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139373770
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
139373770
microRNA pathway
RISC loading complex
139373770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
139373770
NCBI-ProteinID:
XP_070970843
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Position
18:complement(57535890..57554022)
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AA seq
883 aa
AA seq
DB search
MYSSGAAGAAEMLEPPHSSGSIGSDPPSPPVPEYVFKPPSRPDFGTMGRTIKLQANFFEM
EIPKLEVYHYDIDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVYDGRKNLYTAMPLP
IGREKVELEVTIPGEGKDRNFKVAIKWVSCVSLQALQEALSGRLPNIPFETIQALDVVMR
HLPSMRYTPVGRSFFTPSEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKA
QPVIEFMCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGNHSLPGLKVEITHCGQMKRKYRV
CNVTRRPASHQTFPLQQENGQTIECTVAQYFKDKYKLILRYPHLPCLQVGQEQKHTYLPL
EVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSANFNNDPYVREFGVMV
RDEMTEVNGRVLQAPSILYGGRQNKAIATPIQGVWDMRNKQFHTGIEIKVWAIACFAPQR
QCTELLLKAFTDQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFKHLKYTYQGLQLVVV
ILPGKTPVYAEVKRVGDTVLGMATQCVQVKNVQKTTPQTLSNLCLKINVKLGGVNNILLP
QGRPLVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQQHRQDIIQ
DLATMVRELLIQFYKSTRFKPTRIIYYRDGISEGQFNQVRLEVLQHELLAIREACIKLEK
DYQPGITFVVVQKRHHTRLFCMDRNERVGKSGNIPAGTTVDTKITHPSEFDFYLCSHAGI
QGTSRPSHYHVLWDDNHFTSDELQVLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYH
LVDKEHDSAEGSHTSGQSNGRDQQALAKAVQIHQDTLRTMYFA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtattccagtggagctgctggagctgctgagatgcttgaaccacctcactcctcgggg
tcaattggctctgatcccccgtctcccccagtgccagagtatgtgttcaaacccccctcg
cggccagactttggcaccatgggcaggacaatcaaactgcaggccaacttctttgagatg
gagatccccaaactggaggtctaccactacgacattgacatcaagccagagaaatgcccc
agaagggtcaaccgggaaattgtggagcacatggtacagcactttaaaacgcagatcttt
ggggatcgaaagccagtgtatgacgggaggaagaatctctacacagccatgcccttacct
ataggcagggaaaaagtggagctggaggtgaccatcccaggcgaggggaaagaccggaac
ttcaaagtggccataaagtgggtgtcctgcgtcagtctgcaagctcttcaagaagccctg
tctggacgactgccaaacatcccctttgagaccatccaggccctggacgtggtcatgaga
catttgccctctatgaggtacacccccgtcggacgttctttcttcaccccttcagaggga
tgctccaaccccctgggcgggggcagggaggtctggtttgggttccaccaatcggttagg
ccttccctgtggaagatgatgctaaacattgacgtgtcagccactgccttctacaaggcc
cagcctgtgattgagttcatgtgtgaggttttggatttcaaaagtattgaagaacaacag
aaacccttaaccgactcccagagagtaaagtttaccaaggaaatcaaaggtaatcattca
ttaccaggtctgaaggttgagatcactcactgtggtcagatgaaacggaagtacagagta
tgtaatgttaccagaagaccggccagccaccagacgtttccactgcagcaggagaatggc
cagaccatagaatgcacagtagcgcagtacttcaaagacaagtacaaactcatactgcgc
tacccccacctcccctgtctacaggtcggacaggagcagaaacacacctacctccccctt
gaggtctgtaacatagtggctggccagcggtgcatcaagaagctgaccgacaatcaaaca
tccactatgatccgtgccacagcccgatcggcacctgaccgtcaggaagagatcagcaaa
ctgatgagaagtgccaactttaacaatgatccttacgtgcgtgagtttggggtgatggtg
agggatgagatgaccgaggtgaacggcagagtcctccaggccccatccatcctctatgga
gggcggcagaataaagcaatagcaactcccatccagggagtgtgggacatgaggaacaag
cagttccacactggcatagagatcaaggtgtgggccatcgcctgcttcgccccacagaga
cagtgtactgaactcctgcttaaggcgttcacagaccagctgcgtaagatctctcgcgac
gcggggatgcccatccagggccaaccctgtttctgtaagtacgctcagggggcggacagc
gtggagcccatgttcaaacacctgaagtacacctaccagggcctgcagctggtggtggtc
atcctgcctggaaagacacccgtctatgctgaggtgaagcgtgttggtgacacggtgctg
ggcatggccacccagtgtgtccaggtcaagaatgttcagaaaaccactccccagaccctc
tctaacctctgcctgaagatcaatgtcaagctgggcggggtcaacaacatcctcctccca
cagggcaggcccctggtgttccagcagccagtcatcttcctgggtgctgatgtcactcac
cctcctgctggagatgggaagaaaccctccatcgctgcagtggtggggagcatggacgcc
caccccagccgctactgtgccacggtgcgggtgcagcagcatcgccaggacatcatccag
gacctggccacaatggtcagagagctgctcatccagttctataagtccacccgcttcaag
cccacccggatcatctactaccgcgacggcatatctgagggccagttcaaccaggttaga
cttgaggtgctccaacatgagttactggcaatccgtgaggcctgcatcaaactggagaag
gactaccagcccggtatcaccttcgtggtggtgcagaagagacaccacactcgactgttc
tgcatggacagaaacgagagggttggtaagagtggcaacatccctgcaggcaccacagtg
gacaccaaaatcactcacccatcggagtttgacttctacctgtgtagccacgctggcatt
caggggaccagccgaccgtcccattaccacgtgctgtgggacgacaaccatttcacctcg
gacgagctgcaggtgctaacctaccagctgtgccacacctatgtgcgctgcacccgctcc
gtgtccatcccagcaccagcctactacgcccacctggtggcattccgtgcccgttaccac
ctggtggataaggagcatgacagtgcggagggcagtcacacgtcgggacagagcaatggg
cgtgaccagcaggctttggccaaggcagttcagatccaccaggacacactgcgcactatg
tacttcgcctga
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