Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373781
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Entry
139373781 CDS
T10872
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139373781
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Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
TehB
Motif
Other DBs
NCBI-GeneID:
139373781
NCBI-ProteinID:
XP_070970868
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All DBs
Position
18:58026239..58053210
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AA seq
474 aa
AA seq
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MDTAVVVVWLSMVFIVHVSGFTHNDVIGRNIHVQPNLGLKQRTAIQDVITILSRSHADRN
VYPSAGVLFVHVLEREHFKGEFPPYPKPGDSSNDPITFNTNLMGYPDRPGWLRYIQRTSH
SDGVLYGSPTAEHVGKATIIEITAYNRRTFETARHNLVINIMSTEDYPLPYQAEFFIKNM
NVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINNLKEGVYVMVGAD
VQFSSCLREVENPHNQLRCSQEMEPVISCDKKFRAQFDIDWCKINLVDITKVVTIHSNRP
DPGTGVLPDIGEYNPPSESLKSRDFFADFLITLAVPSAVAMVLFTILGYSMCCRREGVDK
RNMQTPDIQLVHHSSIQKSTKELRSMSKNREISWPLSTLPVFSQSGEVVPPIHPDNYETT
SMPLMQTQTNLQNQIQIPQQQPSGDRDNYCMSTFRRLEVNGIPEERKVAEALNL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatactgcggttgttgtcgtatggctttctatggttttcattgtgcatgtatctggt
ttcacacacaatgatgtgattgggagaaacatccatgtacagcctaatctgggtttgaag
cagagaactgccatacaagacgtgattaccatcctgtcgaggtcgcacgccgaccggaac
gtctacccgtctgcaggcgtgctgtttgtccatgtcctggagagagaacacttcaaagga
gagtttcccccctatcccaaacctggggattccagcaacgaccccatcaccttcaacacc
aacctgatgggctacccagaccggccaggctggctgcggtacatccagagaacctcacac
agcgatggggtgctctacggatcccccacagcagaacacgtgggcaaggccaccatcata
gagattactgcctataacagacgcactttcgaaacggcccggcacaacttggtcataaac
atcatgtccacggaagactacccactgccataccaggcagagttcttcataaagaacatg
aatgtggaggagatgttggccagcgaggttctgggagacttccttggcgcagtgaagaac
gtgtggcagcccgaacgcctcaacgccatcaacatcacctcagcgctggacaggggcgga
cgtgttcccctgcccataaacaacctcaaagagggtgtgtatgtgatggtgggggcagac
gtgcagttctcttcctgcctgagggaggtggagaacccccacaaccagctgcgctgcagc
caggagatggagcctgtcatcagctgtgacaagaagttcagggcccagttcgacattgac
tggtgcaagatcaacctggtggacatcaccaaggtggtcacgatccacagtaaccgtccg
gacccaggtacaggggttctgcctgacatcggggagtacaaccccccatcagagtctctg
aagagcagggacttctttgccgacttcctcatcacgttggcagtgccctcggccgtggcc
atggtcctcttcaccatcctgggttactccatgtgctgccggcgagaaggggtggataaa
agaaacatgcaaacaccagatatccagttagtacatcacagctccatccaaaagtcgacc
aaggagctgcggagcatgtctaagaacagggagatctcctggcccctctccaccctgcct
gtcttcagccaaagtggggaggtggtgccccccatacacccagacaactacgagacaacc
agcatgccgctgatgcagacacagacaaacctgcagaaccagattcagataccacagcaa
cagccatcaggagatagagataattattgtatgtcaacatttcggagactggaggtaaat
ggtattcctgaggagaggaaagtggctgaagcactgaacttgtga
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