Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373807
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Entry
139373807 CDS
T10872
Name
(RefSeq) transcription factor RFX4-like
KO
K09174
regulatory factor X 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139373807
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other basic domains
RF-X
139373807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Clr5
Motif
Other DBs
NCBI-GeneID:
139373807
NCBI-ProteinID:
XP_070970926
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All DBs
Position
2:complement(75970836..76008232)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVIKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTWEEHRRLIIDLYQEFDRLLEEQSSIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKAEGSTAEQEEEMMLTETTPTSTSPGPFSPPKSVTSVGVPAASSPTAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSGGTPPEGGQQQPCMRSGAPVPPPSSTHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGAPRLHPTPVAPRWADVSPANSCYTSPPMHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagagcgagagcaagcggtattccagccacacatccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcttctaaaccccattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctatatgcactacctggacttttgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactgaccacaagaagactgggc
accaggggccagtcaaagtaccactactatggcatcgctgtgaaggagagctcccagtac
tacgatgtgatgtactccaagaagggtgcggcttgggtgaacgagacaggcaagaaggag
gtcatcaagcagacagtggcgtattcaccacgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacttaaatctgcccgccagtctgccagaggagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggacacagtaatacgcgccaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccccacatgctc
cctgtcctgggctcctccactgtggtcaacatcgtgggcgtctgtgactccattctttac
aaggcaatctctggggttcttatgcccaccgtcctgcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaaatttgaattgtctagaagattttctcaagttctc
aagaggcagacatctttgaaccatctatgtcaggcatcacggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggcggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacatgggaggagcaccggcggctcatcatcgacttg
taccaggagtttgaccgtctgctggaggagcagtcttctatagaggcctacatcgagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcaggaaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctcatgtggtcgtgcttcgggaccagagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gacgactatgtgctgtacctgctggagtccctgcactgccaggagagggcaaacgagctc
atgagggccatgaaggcagagggtagcacagctgaacaagaggaagagatgatgctgacg
gagaccacgcccacgtccacgtccccagggccattttccccaccgaagtctgtcacctca
gttggggtcccagccgccagctcccccaccgctgcccagtccccagagtacacaggtgcc
acagccaccacaggcgctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaggcggcactcctcccgagggcggacagcagcagccctgcatgcgcagcggtgcaccc
gtgccccctccctcctccacccatcgactaccagtctacgcccacagggacgagcacggg
tttactgggagctataactacgggagctactctaaccagcacccccactccatccagagc
cagtaccccagtctggcccacgaaccaggcatccctgcccccctccactatcccgcctac
caccgcacctctgcacagtacccgctcaatagccagatgtctcggatggagccatgcttg
atgggaggtgctcctcggctgcaccctacacccgtggccccacggtgggcggatgtctcc
ccagccaacagctgttacaccagtccccctatgcactcctcccgctacgccgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgaatacgaacactcacaacacttt
cccggcttcgcttacataaatggagaggccaccacaggctgggccaagtag
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