Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373808
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Entry
139373808 CDS
T10872
Name
(RefSeq) heat shock factor protein 1-like isoform X1
KO
K09414
heat shock transcription factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
139373808
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Gene cluster
GFIT
Motif
Pfam:
Vert_HS_TF
HSF_DNA-bind
DruA
DUF22
Motif
Other DBs
NCBI-GeneID:
139373808
NCBI-ProteinID:
XP_070970924
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Position
18:complement(60435671..60461986)
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AA seq
525 aa
AA seq
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MEFHGGGSGGVVVSGSNVPAFLTKLWTLIEDPDTDPLICWSPNGNSFHVFDQGQFSKDVL
PKYFKHNNMTSFVRQLNMYGFRKVVHIEQGGLVKPEKDDMEFQHPYFIRGQEPLLENIKR
KVTNVSNVKHEDLKMSSDDVSKILTNVQNIKGKQETIDSQIIAMKHENETLWREVASLRQ
KHVQQQKVVNKLIQFLVTLVQSNRVLGMKRKIPLMLNDSSSAHSMPKYSRQYSLEHLQAS
SSISPSGSPFTSTGLFTAESSLNNGPIISDVTDLAQASHVEVTNEWMEESTSPLVHIKEE
PSSHVLEEVCPAEVVIGGAGVQVDTPLSPINFINSILQESNEPNAAPTPTTPTEQKCLSL
ACLDNSTQKSEVSRLFPCPSSSLHLRPIPGSELSDHLDSIDNGLENLQTILNAQSINFES
SPFFEFFSSSLPGSEFDLESLDSIQDLLSSDPPKGAERSDNYTGKQLVQYTNQPMLLTDP
LTNENGGADLPTLLEGDLYFSQDPEEEPTISLTSDTASPDKPKLS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagttccacggtggtgggtctggtggggtcgtggtcagtggcagtaacgtacctgca
tttcttacgaaactttggactcttattgaggatccggacaccgatcctctgatctgctgg
agcccaaatggcaacagcttccatgtgtttgatcagggccaattctccaaggacgtgctt
cccaagtatttcaaacacaataacatgaccagctttgtacgccagctcaatatgtacggc
ttccgcaaagtagtccacattgagcagggcggtctggtgaagcctgagaaggatgacatg
gaattccagcatccctacttcatccgcggacaggagcctctacttgaaaatataaaacgg
aaagttaccaatgtgtccaatgttaaacatgaagacctcaagatgagctcagacgatgtc
tcgaaaatcctgaccaacgtgcagaacattaaaggcaagcaggagaccatagactcccaa
atcattgccatgaagcatgagaatgaaactctgtggagagaggtggccagcctccgacag
aaacacgtccagcaacagaaagtcgtcaacaagctcatccagttcctagtgaccctggtg
cagtccaacagagtcctggggatgaagagaaagattcccctgatgctgaacgacagcagc
tccgcccactccatgcccaagtacagcaggcagtactctctggaacaccttcaggcctcg
tcctctatctctccctcgggctccccattcaccagtacaggtctcttcacggcggagtcg
tcacttaacaacggccccattatctcagatgtcactgacctggctcaggccagccatgtg
gaggtcaccaatgagtggatggaggaaagcacgagcccattggtccacataaaggaggag
ccgtccagtcacgtgttggaagaggtgtgtcctgctgaggttgtgatcgggggggcagga
gtccaggttgacacgcctctgtcccccatcaacttcatcaactccatcctgcaggagagc
aacgagcctaatgcggcccccacccccacgacccctacagagcagaagtgtctcagcctc
gcctgtctagacaattctacacagaagtcagaggtctcccgcctcttcccctgcccctcc
tcgtctctacacctcagacctatcccagggagtgagctcagtgaccatttggacagcatc
gacaatggcctggaaaacctccagactatcctgaatgcacagtccatcaattttgagtcc
tcacccttctttgaattcttcagttcttccctgcctggctctgaattcgacctggagagc
cttgacagtatccaggacttgctttcatcggatccacctaaaggggctgagagaagtgac
aactacaccgggaagcagcttgtccagtacaccaaccagccaatgctactaactgaccct
ttgaccaatgagaacgggggggcggacctccccactctgctggagggggacttgtatttc
agccaggaccctgaagaggaacctaccatctcactcacctctgacacagcatcaccagac
aagcccaaattatcctga
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