Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373843
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Entry
139373843 CDS
T10872
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139373843
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139373843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139373843
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
SR proteins
139373843
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139373843
NCBI-ProteinID:
XP_070971020
LinkDB
All DBs
Position
18:64188994..64203932
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AA seq
407 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGGGGGGGGGGGGGRSGGGYGRGGRDRYGPPART
DYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLDG
TEVNGRKIRLIEDRPGAKRSKRSYSRSRSRSRSRSHRSRKSRSRSESSSRSRSRGAASRS
RSRSHSKKDKDKTKGRREEERTNGAHKAKDVGRSKSRSKSRSKSRSKSRSKSKKTSKKEG
KKSRKDESRSRSRSRSRSAAKDRSRKSGSKSREPAKSDNEAAAAEKGAPRSRSHTPTESK
PKSKSKSKSPSPSPAKARSRSPSVSRSESRSKSRSASRSRSRSLSES
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttacatcggaagattgagctatcgagcaagggaaaaggacgtcgagaag
ttcttcaaaggctatgggaagatacttgaagttgacctaaaaaacgggtatgggtttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaagacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggatggcagctacggc
tcaggaggaggaggaggaggaggaggcggcggcggaggggggggaggaggaggtggtgga
agaagcgggggcgggtatgggcgtggtggcagagacagatatggcccaccggcaaggaca
gactatcggctgatcgttgagaacctgtccagtcgctgcagctggcaggacctgaaggac
tacatgaggcaggcgggtgaggtgacgtatgctgacaccaataaaggacgcaggaacgag
ggagtgatagagttcaggctgtactctgacatgaagagagccctggagaagctggacggc
acagaggtgaacggcaggaagatccggctgattgaggaccgccccggggccaagcgcagc
aagcgctcttactctcgcagccgctccaggtctcgctccaggagccacaggtcccgtaag
agccgcagccgcagtgagagcagcagtcgctcccgctccaggggtgctgcctcccgctca
cgtagtcgctcccacagcaagaaggacaaggacaagaccaagggccgcagagaggaggag
cgcaccaacggtgcacacaaggccaaggatgtgggccgcagtaagagccgcagtaagagc
cgcagtaagagccgcagtaagagccgcagtaagagcaaaaagaccagcaagaaagaaggg
aagaagagcaggaaggatgagtccaggtctcgttcccgctctcgctctagatcagcagcc
aaggatcgctccaggaagtcgggctccaagagccgtgagccggccaagagcgacaacgag
gcagctgcagccgagaagggggctccccgctctcgctcccatacgcccactgaatccaaa
cctaaatccaagtcaaagtccaaatctccatctccctccccggccaaagcccgctcccgt
tccccctccgtctctcgctcagagtcccgctccaaatctcgctccgcatctcgttctcgc
tcccgttctctatcagagtcctga
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