Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374078
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Entry
139374078 CDS
T10872
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139374078
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
139374078
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
139374078
NCBI-ProteinID:
XP_070971163
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All DBs
Position
19:1036206..1056592
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AA seq
481 aa
AA seq
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MEAQPEETALVPEVLQSSAETHGEELELNNGTSTKHLEDGCTAETEPQGLTSGTSDSRLP
GELTGGAEEMEVTENLSSVSSSELGDGTTHTHLPQDLSQDLSQDLSQDPPQDPSQDPPQV
LLTLQDGVCVRDQRDSSSSSSDSDSDSSSSGVTLAVVLGQADEDDDDDEGFSRARKPCSI
KTLDEILPEELPAVEELTVVLPEEAEILPLGSVTSIIQQLVIIQSLKDTPPLKDDSVIFN
SDRLAVGKVFEVFGPVSSPFYVLRFNSLSPPQVFEVFGPVSSPFYVLRFNSESDIAERGV
KLKDSMFYAPSLTDYTLYILTEQLRRLKGSDASWKNDQEPPPEALDFSDDEAEQNMKRKK
KKKGNVQKSERERGQRADQQPDRDSVTRPQMSQRPLQQSCPPRRDNWGPPPRYEGAPYYT
HQPHYPYPPPYQPQSFPLYPPPPPPHMSFPWSPPPSHPDHNLPFSHLPPPPPPPTGPYPP
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccaaccagaggagacggctttggtaccggaggttcttcagagctcagcagag
acacacggagaggaactggaactgaacaacggtaccagcaccaagcacctggaggatgga
tgcacagctgagacagaacctcagggactgacctccgggacctcagacagccgtttaccg
ggagagttaacgggaggagcagaggagatggaggttacagagaatctcagctctgtctcg
agctccgagctgggagatggaaccacacacacacacctcccacaggacctctcccaggac
ctctctcaggacctctcccaggaccccccccaggacccctctcaggaccccccccaggta
ctgctgacgttacaggacggtgtgtgtgtcagggaccagcgggacagcagcagctcctcc
tcagacagtgattcagactcctcttcctccggtgtgacgctggctgttgtgttaggtcag
gcagatgaagatgatgatgacgacgaaggcttcagtcgggcaaggaaaccctgttccatc
aaaaccctggatgagatcctgcctgaggagttgcctgctgtcgaggagttgacggttgtt
ctaccagaggaggcggagatactgcccctaggatcagtcaccagtatcatccaacagctg
gtgatcattcagtcattgaaggacacgccccctctgaaggacgacagcgtcattttcaac
tctgataggctggccgtgggcaaggtatttgaggtgtttgggccggtctccagtcccttc
tatgtgttgaggtttaactctctctctcctcctcaggtatttgaggtgtttgggccggtc
tccagtcccttctatgtgttgaggtttaactcagagagtgacatcgcagagagaggagtg
aagctgaaggactccatgttctacgccccgtctctcaccgactacaccctctacatcctc
actgagcagctacgacggttgaaaggctccgacgcctcctggaagaacgaccaggaacca
ccaccagaggcgttagacttcagtgatgatgaggcagaacagaatatgaaaaggaagaag
aagaagaaggggaatgttcagaagagtgagagagaaagaggacagagagctgaccaacaa
ccagatagagattccgtcaccagaccacagatgtcccagaggcctttgcaacagagttgt
ccaccccgccgtgacaactggggtcccccaccccgatacgaaggggctccgtactacaca
caccagccccactacccctaccctcccccctaccagccccagtccttccccctctatcct
ccccctcctcccccccacatgtccttcccctggtcccctcccccctctcaccccgaccac
aacctccccttctctcacctcccccctcctcccccaccgcccactggcccctatcctcct
cagtga
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