Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374124
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Entry
139374124 CDS
T10872
Name
(RefSeq) POU domain, class 4, transcription factor 2-like
KO
K09366
POU domain transcription factor, class 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139374124
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
139374124
SSDB
Ortholog
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GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HTH_31
DUF4770
Motif
Other DBs
NCBI-GeneID:
139374124
NCBI-ProteinID:
XP_070971224
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All DBs
Position
19:10603369..10606453
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AA seq
380 aa
AA seq
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MMMMSLNSKQAFAMAHASLPEPKYSLHSSSSSTLTSNAPSSCSSSRHSSTIISSGGGNSE
AMRRGCLPTPPSNIFGGLDESLLARAEALAAVDIVSQTKSHHHPPHHSPFKPDATYHTMN
TLPCTSSSSSSSVPISHPSALSGHGHHHHHHHHHHHQPHQALEGDLLDHITPGLALGSMA
GPDGSATAHPAHMAGMNHMHQAALNMAHAHGLPSHMGCMSDVDADPRDLEAFAERFKQRR
IKLGVTQADVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKS
HREKLNKPELYNGGEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV
RVWFCNQRQKQKRMKYSACV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgtctctgaacagcaagcaggcattcgccatggcccacgccagcttgccc
gagcccaagtattccttgcattcctcctcgtcctccacgttgacttcgaatgcgccctcc
tcgtgctcgtcttcccgacacagtagcaccatcatcagcagcggcggaggcaactcggag
gcgatgcgccgaggatgtctcccaaccccaccgagcaatatattcggaggcttggatgag
agtttgttggcccgcgctgaagctctggccgcggtggatattgtctcgcagaccaagagc
caccaccatcctccacaccacagtcccttcaagccggacgcgacctaccacaccatgaac
actctcccctgcacctcctcatcgtcttcttcctcggtgcctatttctcacccttcagcc
ctttccggccacggtcaccaccaccatcatcaccatcaccaccaccaccaaccccaccag
gcgctggagggcgacctgctggaccacatcaccccaggactggctctcgggtccatggca
gggccagacggctccgcaactgcgcaccctgctcacatggcgggcatgaaccacatgcac
caggcagccctcaacatggctcatgcccacgggctaccatcccacatgggctgcatgagc
gacgtggacgccgatcccagggacttagaagccttcgctgagaggtttaaacagagacgg
atcaaactcggcgtgacccaggcggatgtagggggagccttggccaacctgaagattcct
ggcgtgggctccctcagccagagtaccatctgccgattcgagtccctcaccctctcccac
aacaacatgatagctttgaagcccattctacaggcatggctggaagaagccgagaaatca
caccgggagaaactcaacaaacccgagctatataacggcggagagaagaagcggaagcgc
acgtcgatagcagcacctgaaaagcgatcactggaagcttacttcgccattcagccgcgt
ccttcctcagagaaaatcgctgctatagcagagaaactggacctcaaaaagaacgtggtg
cgggtctggttttgcaaccaacggcagaaacagaaacgaatgaaatattctgcatgcgtc
tga
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