Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374128
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Entry
139374128 CDS
T10872
Name
(RefSeq) glycine receptor subunit alpha-3-like
KO
K05195
glycine receptor alpha-3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139374128
04082 Neuroactive ligand signaling
139374128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139374128
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Glycine
139374128
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
139374128
NCBI-ProteinID:
XP_070971228
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Position
19:complement(12651925..12779334)
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AA seq
465 aa
AA seq
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MTRKRLHFVAVWGFFAWEIAVLLSLVASKEPESPRGRAVHPPSPSDFLDKLMGRTSGYDA
RIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYTEYPDGSLDLD
PSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFP
MDVQTCIMQLESFGYTMNDLIFEWQENGPVQVADGLTLPQFIMKDETDLRYCTKHYNTGK
FTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
SSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRLRPRRTKKKD
DDVRESRLSFTATTGGGGAAVKDGTIPKATNNAATTPGATGPQPAQQPKKDPAAKSHEEM
RKLFIDRAKKIDTVSRAGFPLAFLFFNIFYWVLYKILRAEDVHKD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggaaaaggctgcactttgtagctgtatggggattcttcgcgtgggaaatagct
gtgttgctaagtctggtggcgtctaaagagccagagagtcctcgggggagagccgtgcat
cctccgtcaccctccgacttcttggacaaactcatggggagaacctctggatacgatgcc
agaattagacccaactttaaaggtcctcctgtgaacgtatcatgcaacatattcatcaac
agctttggctccatagctgagactacaatggactacagagtgaacatcttcctccgtcaa
aagtggaacgaccccaggttagcgtacacagagtaccctgacggttctctggacctggac
ccctctatgttggactctatctggaaacctgacttgttcttcgccaacgagaaaggggcc
catttccacgaagtcacaacagacaacaagctgttaagaatattcaagaatggcaacgtc
ctctattctatacgattgacattaaccctctcctgtccaatggacctgaagaacttcccc
atggacgtgcagacgtgtatcatgcagctagagagctttggctacacaatgaacgacctg
atctttgagtggcaggagaatggaccagtccaggtagctgatgggttgaccctcccacag
ttcataatgaaggatgagacggatctgagatactgcaccaagcactataacacagggaag
ttcacgtgtatcgaggtgcgattccacctggagagacagatgggctattacctgatccag
atgtacatccccagcctcctcatcgtcatcctctcctgggtctccttctggatcaacatg
gacgccgcgcccgccagggtggcgctgggcatcaccaccgtgctcaccatgaccacccag
agctccggttctagaacgtctctacctaaggtgtcctatgtgaaggccatcgacatctgg
atggcggtgtgtctgctcttcgtattctccgctctgctcgagtacgccgccgtgaacttt
gtctccaggcaacacaaggaactcttaagactccgcccgcggagaacgaagaagaaggac
gacgacgtgagggagagccgcctcagcttcaccgccacgactggcggtggcggcgcggcg
gtcaaggacggcaccatccccaaggccaccaacaacgccgccaccaccccgggcgccacg
gggccccagcccgcccagcagcccaagaaggacccggccgccaagagccacgaagagatg
agaaagctgttcatcgaccgcgccaagaagatcgacacggtatcgcgggcgggtttcccc
ctggccttcctgttttttaacattttctactgggtcctgtacaagattctccgggctgag
gatgtgcacaaggactag
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