Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374130
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Entry
139374130 CDS
T10872
Name
(RefSeq) vascular endothelial growth factor C-like
KO
K05449
vascular endothelial growth factor C/D
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139374130
04020 Calcium signaling pathway
139374130
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139374130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139374130
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139374130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
139374130
NCBI-ProteinID:
XP_070971231
LinkDB
All DBs
Position
19:complement(13089640..13151807)
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AA seq
407 aa
AA seq
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MHLFGISVLLANSAILYANLASESSHEFNHDYYDYDQDQGDAREPSEPDLEQQLRSVASV
EELMRIVYPNYYSVLSCRSKRGARFPLRGEHTATETRSSGELPAFASLNPDTLKSIVSEW
KKTQCMPREVCLDVGKEFGAATNTFYKPPCVSVYRCGGCCNSEALQCMNISTSYISKTLF
EITVSSSTNNNLVTISFANHTVCNCLSKLDAYRQVHSIIRRSLPECLVANKTCPKNHSWS
NRLCKCMAVQRDTPPPPQTQHSDSFEADVCGSDKELDEETCQCVCRRQLRASGACGPHRY
LDKNTCQCVCKTLPSSCGPHQLFNEDTCQCSCARTCPRHQPLNRTKCACECNESPNRCFL
KGKRFHQATCSCHRPPCDVRRSRRCASGFYFSEEVCRCVPTYWRGQD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatttggaatatctgttctccttgccaattcagcgattctctacgcaaatcta
gccagtgaatcgagtcatgaattcaatcacgattattatgattatgatcaggatcaaggg
gatgcacgggagccgtcggagccagaccttgagcagcagctgcgctccgtggccagtgtt
gaggaactgatgaggatagtgtaccctaactactacagcgtgctcagttgccggtcgaag
cggggcgcacgcttccccctgagaggggaacacacagccacggaaacgcggtcgagcggc
gaactgccggcgttcgcttccttgaaccctgacacactgaaaagtattgtgtcagagtgg
aaaaagacccagtgcatgccacgagaagtttgtttagatgtggggaaagagtttggggcg
gctacaaacaccttctataaaccaccctgcgtgtctgtctacagatgtgggggctgctgc
aacagcgaggcgctgcagtgtatgaacatcagcacctcctacatcagcaagacgctgttt
gaaatcacagtttccagcagtacaaataacaacctagtgacgatcagctttgccaaccac
actgtgtgcaattgtctgtccaaactggatgcctacagacaagtacactccatcatacga
cgatctctaccagaatgtctggtagccaataaaacctgcccaaagaaccacagctggagc
aaccgtttgtgcaaatgtatggcggtgcaacgcgacacccctcccccgccccagacacaa
cactcggactcgtttgaagcggatgtctgcgggtcagataaggagttggacgaggagacg
tgccagtgtgtttgcaggcgacagctccgggcctcgggcgcatgcggaccccaccgctac
ctggataagaacacgtgccagtgtgtgtgtaagacgctcccctcgtcctgtgggccgcac
cagcttttcaatgaagacacgtgccagtgctcctgcgccaggacgtgccccaggcaccag
ccgctcaaccgcaccaagtgtgcctgcgagtgcaacgagtcacccaacaggtgcttcctg
aaaggcaaaaggttccaccaggccacctgcagctgccacagaccaccttgtgacgtgcgg
aggagtcgacgctgtgcatcaggtttttacttcagtgaagaggtctgccggtgcgtacca
acatactggagaggacaggattaa
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