Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374185
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Entry
139374185 CDS
T10872
Name
(RefSeq) tubby-related protein 4-like
KO
K24720
tubby-related protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
Tubby family proteins
139374185
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139374185
NCBI-ProteinID:
XP_070971299
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Position
19:26627275..26636605
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AA seq
1915 aa
AA seq
DB search
MSRNYEPGHSVGMLATVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYHEEGWLAT
GNGRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPCFLVEDST
ESDTDSDDNNQPQVRILKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGD
LLAAAGMERHGLPGVPSDPIVRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLF
LACGTALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIIDPKTDSKADEVCVNAIISYMTDSCNCSDSSDIELSDEWVGKKSPKLSRGNG
SPKLSRRNMESRKSPKMSRASQEGPRSPRLPTKKPPIRSPSLTRREMSMDGIPEHNYLAQ
VTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPVF
NPNVFSEDEDDLPVMGPSGVTSDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN
IQLDVLTNPTATASAAAAAAAASASIAGPDHGQNAVAAQYSGTLGRYSNPGQVIFNRLEI
GPLLAGTLPPPLPPHHPPQQPQQQRPQSQQTHQQQSKQPPQILTQQQQQQQQQRMQQHQQ
LQHQQQQIQQQHQQLQQHHIQQIQQQQQQQTQQHQALQQQHQQQQAALQQQQQQIQHQHQ
HLQQQQIAQQHQQMQLQHEQMHQQQQQMQQQQQQIRQQIIEMRQQQQQLQQQHQQIQQQH
QQMQRQHQQMQQQLKLQITLPPPPTGYPTISLQQFQVLQQIPHPSAELGPERGEQGHTQS
HTLGRPSLPRSRPPSFIDVDSLRSRPPSFIEADTSRSRPPSFIDIDTIRTRPPSFIDADT
GTLRSRPPSFLDADSSRSRPPSFIDTDTLRSRPPSFLDAETSLEIQMRKVNPPPPYPGTI
VSAATATTSTAPQTLITNCDNPNILVTADPCLKKDEFSLHQVGLQYQMGYERITTFDSSG
NVEEVCRPRRRLISNQNTYSVQGMGGSATLKVTSSSDSKKVQLPYSSATLSRLSVPRYSI
PSRDPPPYPDPANQVNINTTTLSPPQRMDSSHMIHATLRPDRRDVESRLKVSQMVDASRT
LPTKSKINSAALALSYQQRVPTALYTCTQCSSNSSSTSVSVSGGGSSSSGIAGGTVVRQD
FPPGKGAHHSTIIVHSKSTSSQASQSSYNLLSPVDNSRDRTVYVNSAFTEDETLSQQCRH
LTLGEVSLTLKRPPPYQWDPNTAEEFWIPPEQTILAPPPPPTHKPPPPIIFSNAQHLDMT
RLPFVLSTKPPSSPSTVTFPSGYQISMSPFPPGVGQDGSPLQSMQSHPPPCPPNEVVAPV
PQFAQQDPNLVLPPGYPPSHSNLACCPLPPMYPGAASCAGLQLHPVSLHPWNPYSLPMQD
LSGSATLPNKSHQVLEKPVLSPPPPVAPPPQPLTLPPPPPTELPKSKSPTEELAVSASSF
QEPSSLNESPVPDRQGSDMFSKKSRKRLDSRAEAANMTTVSEGKSKKEGRALSDFNSLIS
SPRLGGREKKKLKGQREQLNKTKKLNRTSTNSEFQDSSESEPELFISGDELMNQSQSSKK
GWKSKRSLRMASELEEIKCRKANEREDRGLGSQGFIYVMANKQPLWNEATQVYQLDFGGR
VTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactatgagcctggtcactcagtagggatgttggctactgtggaacatggt
cccatcctctgcagcgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagccggtgtgccagcggcgctaccatgaggagggctggctggccaca
gggaacgggagaggggtggtgggcgtgacgttcacatccagccactgcaggagagacagg
aacactcctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtt
cgttggaatgagccctttcagaagttggccacgtgtgacatggagggaggcatcttcgtc
tggattcagtatgagggacggtggtctgtagagttagtgaatgaccgtggtgcccaggtg
agtgatttcacatggtcccatgatggcactcaggccttgatcgcctacagggatgggttt
gtcttggtggggtcagtcagcggacagagacactggtcctcagagatcaacctggagagc
cagatcacctgtggcatctggacacctgacgaccaacaggtgttgtttggtacagccgac
ggtcaggtgatagtgatggactgtcatggtcgcatgctggcccatgtcctgctacacgag
tcggatggcatcgtcagcatgtcatggaactgcccctgcttcctagtggaggacagcaca
gaaagcgacaccgactctgatgacaataaccaacctcaagtgcgtatcctgaagcccctt
ctgaccgttagcttcatatcaggcgacatcagtttgatgaacaactacgatgacctcgct
cctaccgtcatccgctcaggactcaaagatgtggaggtccagtggtgttctcagggggac
ctcctggcggcagctgggatggagagacatgggctccctggagtcccctctgaccctatc
gtgaggaacgccctggtcaaattctacaacgtccaaggagaacatatctacacgttagaa
acacctgcccagcgccccatcaccactatctgctggggccacagagactctcgtctgttc
ctggcgtgtggcacggcgctgtacgtggtgcgggtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagtgccctgcgggaggagagggacgtgggcaaacta
aacatgccctccttactctgttcctatgtcacaaccgccttcatacccaccatcaagcct
cctattcctgatcccaacaacatccgggactttgtcagctaccccacagctggtaacgag
aggctgcactgcaccatgaagcgagcggaggacaacccagaggcagggggaccctgttac
accctctacctggaacacctaggtggtctggtgcccatcctcaaaggcagacgcatcagc
aagctacggccagagttcatcatcatagaccctaaaacagacagcaaagcagatgaggtg
tgtgtgaatgctatcatctcctacatgactgacagctgtaactgttcggactccagcgac
attgagttgagtgatgagtgggtcgggaagaagtcccctaaactgtccagaggaaacggg
tcacccaagctttccagaaggaacatggaatctagaaaatctcccaaaatgtctcgggct
agtcaagaaggcccacgatcaccccggttaccaacaaagaagccaccaattcgatctccc
agtttgacgcgtcgagagatgtccatggatggaatccctgagcataattatcttgctcaa
gtcacgtccaatatttgggggacaaagttcaaaatcgttggacttgcttctttcctacct
gctaatcttggtgcagttatctataagaccagtttgctgcatctacaaccaaggcagatg
acaatctaccttccggaggtgcggaaaatatcacttgacttcatgagcctgcctgtcttt
aacccaaacgtcttcagtgaggatgaggatgacttgcctgtgatgggaccatctggagtg
acaagtgacaaccctccctgtacggtcaacatccccatcgcacccatccacagccctgcc
caagccatgtcccccactcagagcattggactggtccagtccctgctggccaatcagaac
atccagctggatgtcttgaccaatcccacggctacggcttcagctgcagcggccgctgca
gcagcctcggcctctattgcagggcctgatcacggtcagaatgcagtagcggcacagtac
agtgggactctaggaaggtactccaacccaggacaggtgatctttaacaggctagagata
ggtcccctcctagctggaacactgcctccacctctgcctccacaccacccccctcaacaa
cctcaacaacaacgtcctcagtctcaacagacacaccaacaacagtccaaacaaccaccg
cagatactaacccaacagcagcagcagcaacaacaacagagaatgcaacagcatcaacaa
ctacagcaccagcaacagcagattcaacaacaacatcaacaactacaacagcatcatata
cagcagatccaacagcagcagcagcaacagactcagcagcaccaagcactgcaacaacag
caccaacaacaacaggcagcactgcaacagcaacaacagcagatccaacatcagcaccaa
cacttgcaacaacagcaaatcgctcagcagcaccaacagatgcaactgcagcatgagcaa
atgcatcagcagcagcaacaaatgcagcagcaacagcagcagatccgacagcagattata
gagatgaggcagcaacaacagcagctgcagcagcaacatcagcagatacaacagcaacac
caacagatgcagaggcagcaccaacaaatgcagcagcaactgaagctgcagatcaccttg
ccccctccgcctactggctatcccaccatctctctgcagcagttccaggtactgcaacag
ataccccaccccagtgcagagttgggaccagaaagaggagagcaggggcatactcagagc
catactctgggcaggccaagtctaccgcgatccaggcctccatcattcattgatgtagac
agcttacggtccagacctccttccttcatcgaagcagacacatcaagatctagaccaccg
tcattcatcgacatagacacaatacggactagacctccttctttcattgatgcagataca
ggtacattgcggtctagacccccgtcgttcctcgatgcagactcctcccgatccagacct
ccttcattcatagacacagacacactacgttctagacctccttccttcctcgatgcagag
acttcccttgagatacagatgaggaaggtgaaccctccaccaccctacccaggaaccata
gtgtctgcagccaccgccacaacctccaccgctcctcagaccctcatcaccaactgtgac
aaccccaacatactggtcacagcagacccgtgtctgaagaaagacgagttctcactccac
caagttggtctccagtaccagatgggatacgagaggatcacaacctttgacagcagtggg
aatgtagaggaggtgtgtcgccctcgcagaagactcataagcaaccagaacacctactct
gttcaaggcatgggaggttcggccacacttaaagtcacctcatcgtctgacagtaagaaa
gtccagcttccttacagctcagcgactctaagccgcctctctgtgccacgatactccata
cccagcagagacccgcccccctacccagatccagccaatcaggttaacattaacacaacg
acactttctcctccccagcgcatggacagtagtcacatgattcacgccaccttgcgacct
gaccggcgagacgtggaatctcgcctgaaggtgtcccagatggttgacgcttcaaggact
ctaccaaccaagtctaagatcaacagtgcggccctagcactctcttaccagcagagggtg
cccacggctctgtatacctgcactcagtgcagcagcaacagcagcagcaccagtgtcagt
gttagtggtggtggtagtagcagcagtggcatcgcaggaggcactgtagtgcgacaggat
ttcccaccaggaaaaggtgctcatcacagcaccatcattgttcactccaaaagcacttcg
tctcaagcttctcagtcatcttacaatctgctgagtcctgttgataacagcagggatagg
actgtgtatgtgaactctgcctttaccgaagacgagacattaagtcagcagtgtcgtcac
ttgactcttggggaagttagtttgacactgaaacgtcctccaccataccagtgggaccca
aacactgcagaggagttctggatacccccagaacagactatcttagctcctcctccacca
ccaacacacaaaccaccccctccgatcatcttcagcaatgctcagcatctggacatgaca
cggctgccttttgtactctcaacaaaacctcccagcagcccaagtactgttactttccca
tcaggttaccagatctccatgtcacctttccctccaggggttggtcaggatggatcccca
ctccagtccatgcagagccatccaccaccctgccctcccaacgaagtagttgctccagtc
ccccagtttgcccagcaggaccccaacctggtcttgccacctggataccctcccagccat
tccaacctagcttgctgccctctgcccccgatgtacccaggggccgcctcctgtgctggg
cttcagctgcaccctgttagcctgcacccctggaacccatatagcctacccatgcaggac
ctgtcaggctctgccaccctccccaacaagtctcatcaggtgttagaaaagccagtcctc
tccccacctcctcctgttgctccccccccacaacctcttacacttcctcctcctccacca
accgagctgccgaaatccaaaagccctacagaggagctggcggtatctgccagtagcttc
caggagccgtcttctctaaacgaaagccccgttccagaccgacaggggtccgacatgttc
agcaagaaaagtcgtaaacgtctagacagccgagccgaggcggcaaacatgaccaccgtc
tcagagggcaaatccaaaaaggaagggcgcgccctctccgatttcaactccctcatctcc
agccccaggcttggcggcagggagaagaagaaactcaaaggccagagggagcagctgaac
aaaaccaagaagctcaacaggaccagcaccaacagcgagttccaggacagttcggagagc
gagcccgagctcttcatcagcggagacgaactgatgaaccagagccagagctccaagaag
ggttggaagagtaagagaagcctgaggatggccagtgaactggaggagattaagtgcagg
aaggccaatgagagagaggatcgtgggctgggcagccagggattcatctatgtcatggcc
aataagcagccactctggaatgaggccacacaggtctaccagttggacttcggaggacga
gtcactcaggagtctgctaagaactttcagatcgagctggacgggagacaggtgatgcag
tttggcagaatcgatgggaacgcatatatcctggatttccagtatcctttctcagcagtg
caggcctttgctgtggccttagccaatgttactcaaaggctgaagtaa
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