Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374242
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Entry
139374242 CDS
T10872
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139374242
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
139374242
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
Ig_2
ig
LRR_9
LRR_14
LRR_EndoS
LRR_R13L1-DRL21
V-set
LRR_NXF1-5
LRR_Zer-1
LRRNT
LRRCT
Big_6
Ig_C17orf99
Big_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
139374242
NCBI-ProteinID:
XP_070971369
LinkDB
All DBs
Position
19:38124443..38166059
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AA seq
611 aa
AA seq
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MRRSALYHCYPLLGGAVLLLLVSCVLGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRRLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGIGALKPYSFKRLPHLRHLEIDYWPWLEV
FPALSLHGLNLTTLTVTNTNLSSFPGPALRNLPYLTHLNLSFCRIQHIQQGVLDKLPRLQ
ELHLRGAQLAYIEPLAFLALPNLRMLDVSHNQLDSVEQAVFASPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPLLQLPDPQPECSAPERIRGKPLRDLKEPLVSRYVTCTKPRIGPNTTQ
LLLTEEGQPVWLNCIADGAPRPSMAWVTPHRRYVTAKSTGRVTVHTNGTLEIKAAELHDN
GVYLCVASNAAGNASMSASLAVKSLGISDRSLYTNKSGLLADSNGTWANGTLLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRKSNGTAAEANET
SGPRRVNMKMI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgctctgccctgtaccactgctaccctcttctgggcggggctgtactgctcttg
ctggttagctgcgtcctgggttgccccgctcgctgcgactgctccgcccagaccaagtca
gtcagctgccaccgcaaaagactgcctaccatccccgagggcatccccattgagactcgg
cttctggatctgagcaagaacaaactgcggagcattacaccagacaacttctcctccttt
ctacagctcgaggatctagacctcagcgataacctgataggcgtggtcgaaccgggctcc
ttcaaatttcagctttccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cccgccggtgtgctctctggcctggccaacctcaccagtctggacctcagccacaaccgg
ttggtggtgctgctggaccacggcttccaggaccttcggaggctgatgtcactggaggtg
ggtgacaatgagctggtgttcatctcccagagggcctttactggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgttgtgcccactgatgccctggggcaccta
catagcctggtggaactccgcctgcgtcacctgggcattggtgccctgaagccctactcc
ttcaaaagacttccccaccttcgccacctggagattgactactggccctggctggaagtc
ttccccgctctgtcgctacacggtctcaacctcaccacactcaccgtcaccaacactaac
ctgtcctcttttcccggccctgctctacgcaacctgccctacctcacgcacctaaactta
tccttctgccgcatccagcacatccagcaaggggtgctagacaagcttccacgactgcag
gagttgcacctgcgaggggctcagctggcttacattgaacccctggccttcctggcacta
ccaaacctgcgcatgttggatgtgtcgcacaaccagctggactctgtggagcaagctgtg
tttgcgtcccctgacagcctgcagacgctgcttatgggggggaaccctctggtgtgcgac
tgccggctcctatggctgctgagtggccggaagccacccttgctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcatccgtgggaaacccttgcgggacctcaaggag
ccgctggtgtcacggtatgtgacctgcaccaagccacggatcgggcccaacaccacccag
ctgctgctgacagaagaggggcagcctgtctggctcaactgcatagcagacggggctcca
cgaccatccatggcctgggtgacgccacacagacgctatgtcacagccaaaagcaccggg
agggtgacagtccataccaacggcaccctggagattaaggctgcggagctgcacgacaat
ggtgtgtacctgtgtgtggccagtaatgcggcgggcaatgccagcatgtcagcctcgctg
gctgtgaagagcctgggcatcagcgatagatcactctacaccaacaagagcggactcctg
gcggactccaacgggacctgggccaacggcaccctcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagccatgggctgcctgtctttcctgggcgtggtc
atcttctgtttcctcctcctgtttgcctggagtcgtgggaagggaaggcacaagagcaac
ttcgacattgagtacgttccccgcaaatcgaatgggacagcagcagaggcaaatgaaaca
agcgggcccagacgagtcaacatgaaaatgatttaa
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