KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374242
Entry
139374242         CDS       T10872                                 
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139374242
Membrane trafficking [BR:ocla04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    139374242
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 I-set Ig_3 LRR_5 Ig_2 ig LRR_9 LRR_14 LRR_EndoS LRR_R13L1-DRL21 V-set LRR_NXF1-5 LRR_Zer-1 LRRNT LRRCT Big_6 Ig_C17orf99 Big_2 LRR_6
Other DBs
NCBI-GeneID: 139374242
NCBI-ProteinID: XP_070971369
LinkDB
Position
19:38124443..38166059
AA seq 611 aa
MRRSALYHCYPLLGGAVLLLLVSCVLGCPARCDCSAQTKSVSCHRKRLPTIPEGIPIETR
LLDLSKNKLRSITPDNFSSFLQLEDLDLSDNLIGVVEPGSFKFQLSLRSLNFHSNLLQLV
PAGVLSGLANLTSLDLSHNRLVVLLDHGFQDLRRLMSLEVGDNELVFISQRAFTGLLGLQ
SLTLERCNLTVVPTDALGHLHSLVELRLRHLGIGALKPYSFKRLPHLRHLEIDYWPWLEV
FPALSLHGLNLTTLTVTNTNLSSFPGPALRNLPYLTHLNLSFCRIQHIQQGVLDKLPRLQ
ELHLRGAQLAYIEPLAFLALPNLRMLDVSHNQLDSVEQAVFASPDSLQTLLMGGNPLVCD
CRLLWLLSGRKPPLLQLPDPQPECSAPERIRGKPLRDLKEPLVSRYVTCTKPRIGPNTTQ
LLLTEEGQPVWLNCIADGAPRPSMAWVTPHRRYVTAKSTGRVTVHTNGTLEIKAAELHDN
GVYLCVASNAAGNASMSASLAVKSLGISDRSLYTNKSGLLADSNGTWANGTLLYNMTNPI
DLKTIIISTAMGCLSFLGVVIFCFLLLFAWSRGKGRHKSNFDIEYVPRKSNGTAAEANET
SGPRRVNMKMI
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcggcgctctgccctgtaccactgctaccctcttctgggcggggctgtactgctcttg
ctggttagctgcgtcctgggttgccccgctcgctgcgactgctccgcccagaccaagtca
gtcagctgccaccgcaaaagactgcctaccatccccgagggcatccccattgagactcgg
cttctggatctgagcaagaacaaactgcggagcattacaccagacaacttctcctccttt
ctacagctcgaggatctagacctcagcgataacctgataggcgtggtcgaaccgggctcc
ttcaaatttcagctttccctgcgctcgctgaacttccacagcaacctcctccagctggtc
cccgccggtgtgctctctggcctggccaacctcaccagtctggacctcagccacaaccgg
ttggtggtgctgctggaccacggcttccaggaccttcggaggctgatgtcactggaggtg
ggtgacaatgagctggtgttcatctcccagagggcctttactggcctgctgggcctacag
agcctcaccctggagcgctgcaacctgactgttgtgcccactgatgccctggggcaccta
catagcctggtggaactccgcctgcgtcacctgggcattggtgccctgaagccctactcc
ttcaaaagacttccccaccttcgccacctggagattgactactggccctggctggaagtc
ttccccgctctgtcgctacacggtctcaacctcaccacactcaccgtcaccaacactaac
ctgtcctcttttcccggccctgctctacgcaacctgccctacctcacgcacctaaactta
tccttctgccgcatccagcacatccagcaaggggtgctagacaagcttccacgactgcag
gagttgcacctgcgaggggctcagctggcttacattgaacccctggccttcctggcacta
ccaaacctgcgcatgttggatgtgtcgcacaaccagctggactctgtggagcaagctgtg
tttgcgtcccctgacagcctgcagacgctgcttatgggggggaaccctctggtgtgcgac
tgccggctcctatggctgctgagtggccggaagccacccttgctgcagctccctgacccc
cagcccgagtgcagtgcccctgagcgcatccgtgggaaacccttgcgggacctcaaggag
ccgctggtgtcacggtatgtgacctgcaccaagccacggatcgggcccaacaccacccag
ctgctgctgacagaagaggggcagcctgtctggctcaactgcatagcagacggggctcca
cgaccatccatggcctgggtgacgccacacagacgctatgtcacagccaaaagcaccggg
agggtgacagtccataccaacggcaccctggagattaaggctgcggagctgcacgacaat
ggtgtgtacctgtgtgtggccagtaatgcggcgggcaatgccagcatgtcagcctcgctg
gctgtgaagagcctgggcatcagcgatagatcactctacaccaacaagagcggactcctg
gcggactccaacgggacctgggccaacggcaccctcctgtacaatatgacaaaccccata
gacctgaagaccatcatcatctccacagccatgggctgcctgtctttcctgggcgtggtc
atcttctgtttcctcctcctgtttgcctggagtcgtgggaagggaaggcacaagagcaac
ttcgacattgagtacgttccccgcaaatcgaatgggacagcagcagaggcaaatgaaaca
agcgggcccagacgagtcaacatgaaaatgatttaa

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