Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374357
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Entry
139374357 CDS
T10872
Name
(RefSeq) transcription factor E2F2-like
KO
K09389
transcription factor E2F2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139374357
04218 Cellular senescence
139374357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139374357
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
139374357
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
139374357
NCBI-ProteinID:
XP_070971495
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Position
19:55821082..55840598
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AA seq
454 aa
AA seq
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MMRMPKGVSPASSRGAVGGLSCSQNKVLSGVKTEFFSTGLPSPPMNSVPAGYFTQICNTT
AAEQRANCLYATPHGPEAKPIRSSSGRLPAKRKLDLEDPLYLPDFRTPKGKGSTAAASHP
SPKTPKSPGERTRYDTSLGLLTKKFVGLLSESPDGVLDLNWATEVLEVQKRRIYDITNVL
EGVQLIRKKSKNNIQWLVGGVFEGSASSGEKSRALRRELGELERAEKALDDLITSSSAQI
KELTEHRDNQRLGYVTYQDIRSIARLQDQTVIAVKAPSETKLEVPESSGGSQQIYLKSKN
GPIEVYLCPEEGLEDASPVKSTTTPRKEYSHHPLGHTATTSPAMAPPQYTTIKQEVKQES
IEAELSRPTPVVPNSSTSSSTTLLDVEGLLGLPPSMLQMTEDQLSGPGFTPDPNAPFVSF
SPALDHDDYLWGLEDGEGVSDFFDTYDLGDLLRS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggatgcccaaaggcgtttctcctgcgtctagccgaggtgctgtagggggactg
tcgtgttcgcagaataaagttttgtccggagtgaagaccgagttcttcagcaccgggtta
cccagtccaccgatgaactcggtaccggctggatactttacccaaatatgcaacacgaca
gcggccgaacaaagggcgaactgcctgtatgctaccccccatggacccgaagctaaaccc
atcagatcatcctccggccgtctcccggccaagcgaaagctggacctggaggacccgctc
tacctccctgacttcaggacccctaaagggaaggggagcacagccgcagccagtcatcca
agtcccaaaacgcccaagtctcctggtgagcggacgcgctacgacacctcgcttggtttg
ctgaccaagaagtttgttggcctgctgagcgagtcacctgacggcgtgctggacctcaac
tgggccaccgaggtcctcgaggtgcagaagagacgcatctatgacatcaccaacgtgctg
gagggcgtgcagctgatccgcaagaagtccaagaacaacatccagtggttggtgggcggt
gtgttcgagggctcggccagcagcggggagaagtcacgtgccctgcggcgggagctgggt
gagctggagagggctgaaaaggccttggatgatctgatcacgtccagtagtgcccagatc
aaggagctgaccgaacacagagacaaccagcggctaggctacgttacctaccaggacatc
aggtcgatagcccgtctgcaggaccagacggtcatcgctgtcaaggccccgtcagaaacc
aagctggaggtcccagagtcctcagggggctcccaacagatctacctgaagagtaagaac
ggccccatcgaggtgtacctctgtcccgaggagggcctggaggatgccagccccgtcaag
agcaccaccacccccaggaaagagtactctcatcaccccctgggtcacactgccaccacc
tccccagccatggcaccaccacagtacaccaccatcaaacaggaggtcaagcaggagtcc
attgaggctgaactctccagaccaacaccggtggtccccaactcctccaccagcagcagc
actaccctccttgacgtagaaggtctcctgggcctgccccccagcatgctccagatgaca
gaggaccagctctcgggacccgggtttacccctgaccccaacgcccccttcgtcagcttc
tcaccggccctcgaccacgacgactacctatgggggctggaggacggcgagggcgtgtcc
gacttcttcgacacctacgacctgggagacctgctgcgaagctga
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