Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374392
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Entry
139374392 CDS
T10872
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139374392
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
139374392
Autophagy
ER-phagy
ER-phagy recepters
139374392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
139374392
NCBI-ProteinID:
XP_070971541
LinkDB
All DBs
Position
19:complement(60575990..60612590)
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AA seq
568 aa
AA seq
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MARNRKDRDSWGSFTDKATYDWSSEEEEPDGSARPIQVLVVKDDHTFELDEAALSRILLA
EEVQNREVVAISVAGAFRKGKSFLMDFMLRYMYSQVSSKASEEWLGEAEEPLTGFSWRGG
SERETTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQV
YNISQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFGYGQEGGMKF
LEKRLKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRLKEIDREFIN
NLQVLVPWLLSPRNLDVKEINGSNITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEAN
NLAAVAAARDLYNRKMEQVCGGDRPFLAPAELQARQSDIREEALQVFRGVKKMGGEEFSR
RYLLQLEGEVDEVFVQYIKHNDSKNIFHAARTPATLFVVIFSMYVAAGITGFVGVDIIAS
VCNMILGLALITLCTWAYIRYSGEYRELGQVIDQVAGALWDQGSTNEALYKLYTAAASHR
HLYHHAFPGPQARGETSDTHQEPTRKRN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaccgtaaagacagagacagctgggggtccttcacagacaaagccacctat
gactggagctcggaggaggaggagcctgatggaagtgcgcggcccatccaggtgctggtt
gtcaaggacgaccacaccttcgagttggacgaggcggcgctgagccgcatcctattggcc
gaagaggtccagaacagggaagtggtggccatatctgtggctggggcgttccgcaagggc
aagtccttcctcatggacttcatgctgcgttacatgtacagccaggtgagttcaaaggca
tctgaagagtggctgggggaggcagaggagcctctgactgggttctcctggaggggtgga
tctgagagagagaccacagggattcagatctggagcgaagtctttctggtggacaagcca
gatggacgcaaggtggctgttctactgatggatactcagggcacgtttgacagccagtcg
acgttgagggattcagccaccgtgttcgcactaagcaccatgatcagctccatgcaggtg
tacaacatctcccagaatgtccaggaggatgatcttcaacacttgcagctcttcactgag
tatggtagactggccatggaggagacattcctcaagccattccagtccatgatattccta
gtccgggattggagtttcccttacgagtttggctatggacaggaaggaggcatgaagttc
ctggagaagaggctcaagatctctgagaatcagcatgaggagctgcagaacgttcgtaaa
cacatccactcctgcttcaccaacatctcctgcttcctgatgccccaccccggactcaaa
gtggccaccaaccccaacttcgacggcagactcaaagagatcgaccgtgagttcatcaac
aacctgcaggtgctggtcccgtggctgctgagtcccaggaacctggatgtcaaggagatc
aacggcagcaacatcacctgcagaggcctgctggagtacttcaaggcatacatcaaaatc
taccagggtgaggagctgccacaccctaagtccatgctgcaggccacagcggaggccaac
aacctggcagcagtggcagcagccagggacctgtacaacaggaagatggagcaggtgtgt
ggtggggaccggcccttcctggccccggcagagctccaggccagacagagtgacatcaga
gaggaagccctccaggtgtttcggggggtgaagaagatgggaggggaggagttcagccga
cggtacctgctacagctggagggtgaagtggacgaggtgttcgtccaatacatcaagcac
aacgactccaagaacatcttccacgccgcccgcaccccggccacgctgttcgtggtcatc
ttcagcatgtacgtggcggcggggatcacgggcttcgtgggggtggacatcatcgccagc
gtgtgtaatatgattctgggcctggcgttgatcaccctgtgtacctgggcctacatacgc
tactctggggagtaccgagagctgggtcaggtcatcgaccaggtggctggagccctctgg
gaccagggaagcacaaatgaggctctatataagctgtatactgctgcagccagtcacagg
cacctgtaccaccatgcattccctggcccccaggcccgtggagagacgagcgatacccac
caggaacccaccaggaagaggaactga
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