Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374476
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Entry
139374476 CDS
T10872
Name
(RefSeq) transcription factor E2F4-like
KO
K04682
transcription factor E2F4/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04218
Cellular senescence
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139374476
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139374476
04218 Cellular senescence
139374476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139374476
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
139374476
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
139374476
NCBI-ProteinID:
XP_070971603
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Position
2:79435229..79443679
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AA seq
396 aa
AA seq
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MELESERTEFGAMGDSLQPQTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVR
QKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTQEIADKLIDLKAELDDLDKREHE
LDQQRVWVQQSIMNVTDDSQNSPMAYVKHEDLCSAFKGDTLLAIRAPTGTQLEVPIPESV
LIGQKKYQIRLKSSAGPIEVLLVNKDPSSPSPVVLSVPPPEDMLQSLPVPAAANTKPTPT
APSQPSQPLAHSSNPSPATLLPACTATSNQAVTTAVSSTPTVSTPTTNTNAQLTPLLDTQ
PLQSSASLDGCCSSSAVFEPIKADPSELLYFPKELSDMFDPTKEIMSADLLEELMSSEVF
SPLLRLSPPPGDHDYIYNLDETEGLCDLFDVPILNL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagtcggaaagaaccgaatttggagctatgggtgactcgcttcaacctcaa
accccaagtcgacacgagaagagtctaggattgcttacaaccaaatttgtatctttgcta
caagaggccaaggatggagttctagacctgaaagcagcagcagacaccctagctgtaaga
cagaagcggcgcatctacgacatcaccaatgtgcttgagggcatcggactgatcgagaag
aagtctaagaacagtattcagtggaagggtgttggtcctggctgtaacacacaggagata
gccgataaactcattgatctgaaggcagaactggatgatctggacaagcgggagcacgag
ttggatcaacagagagtctgggtccagcagagcatcatgaacgtcacagacgactcacag
aacagccctatggcttatgtaaaacacgaagacctctgtagtgctttcaaaggtgacact
ctcctagctatccgcgctcccacaggcacacaactggaggtgcccatacctgagtcggta
ctgattggacagaagaagtatcagatccgtctcaagagctcagcaggacccattgaggtt
ctccttgtgaacaaggacccatccagcccgtctccagtggtactgtccgtccccccaccc
gaggacatgctccagagccttccagtgcctgctgctgccaacacaaaaccgacacctact
gccccctcacagcccagccagcctctggcccactcctccaacccgagtcctgccacactc
ttacctgcctgcacagctacttctaatcaggcagtcaccactgcagtgtccagcacaccg
actgtttccacacccactacaaacacaaatgcccaattgactcccctgttggacacccag
cctctccagtcctctgcctcattggatggctgctgttcttcttcagcagtctttgaacca
atcaaggctgacccctcagaattgctgtatttccccaaagaactttcagacatgtttgac
ccgactaaagagatcatgagtgcagacctgttggaggagttgatgtcttccgaggtgttc
tctccactcctccgtctatctccccctccgggtgaccacgactacatatataacctggac
gaaaccgaaggcctgtgtgacctctttgatgttccgattcttaacctttga
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