Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374562
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Entry
139374562 CDS
T10872
Name
(RefSeq) prominin-1-A-like
KO
K06532
prominin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139374562
04090 CD molecules [BR:
ocla04090
]
139374562
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139374562
CD molecules [BR:
ocla04090
]
Proteins
139374562
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Mucin
BCDHK_Adom3
LRR_TTSS
Motif
Other DBs
NCBI-GeneID:
139374562
NCBI-ProteinID:
XP_070971659
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Position
19:717522..768545
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AA seq
880 aa
AA seq
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MLWRAGLVLLLCWGSTGELRHQPRDSPEREDPTSKLQADSASVSTRQQRSPPPIEPLDFG
FVPSGVYDTHAYYEPGAIGVLFHMVHAFLYVVQPNPFPKDLIVKVIQQNMGGIKLEDYRK
PENVVLMLQTIYYEAGFLLCVSLGCVFLVLTPVVGLCFCVCRCCENCGGEMHQRQGKNPD
CQRGFYTAALITTSIFITTGVLIAHAANHNITSQIKSTRRFISTNMRDLKTFANNTPAQI
DHLTAQYTTAKNKVLSDLDNIGPLLGGRIQTQLEKEVVPSLDTALRMAGGKVENAVKALR
ESKEALESVSSSLDVLHEGTSRLALRLTYERTSLSNTLSDPACTNGAVSRTCNNIRITLP
QLGINSNFSGLPDVSPQLASLEIALKTDLSNILQKGYSSFNDTPRLVQQQTKNVVAALPR
VKAMLDKIGVEIIGFSKMFPVEASLANFTIFLSQGQKNMEAYYPQIDQMDFYRWIGCVAV
LCSVVLVLTFNFLGLLCGTCGYDKQATPTTRGCLSNTGGNLLMAGVGFSFIFAWVLMGLV
SAGFVVGGNIEKLFCEPLANRQLFKIIDTPYMVHPAKKNFLPGMLFQNPNINLTVGSMYR
DCYDNNGLYHALQLETMFNINTFLKTTVFNKDLVKVFDSVSIDLQSIVLLEQDGRDDLLT
FSNAGIGDINYAAYLAEVNKGVTLVDLLSFSNELEAQADLLPRGALENALKGHASSIRQI
HREQVVPMEQAMKFVRARSTLSQSIRLLQRTAKELPVKVTNVLSAIDEAEYLITHNASRV
VKQERDVYMQSLVGYFRQYTDWVKNSLTGEVSQCKPISNIIDSMEIVACSFIVDSVNTFW
FGLGGCCVFLVPSIILSVKLAKYYRRMDTEDVFEEGQENW
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggagagcggggctcgtgttgctgctgtgttggggcagcaccggggagctacgt
catcaaccccgggactccccggaacgtgaagacccgacgagcaaactgcaggcagactcc
gcgtccgtgagcacgcggcagcagcggtccccgcccccgatagaacccctagactttggg
ttcgtgccctccggtgtgtacgacacgcacgcctactacgagcccggtgccatcggtgtt
ctgttccacatggtgcacgcgttcctttacgtggtccaaccgaaccccttcccgaaagat
ctcattgtaaaagtcatccaacagaacatgggagggataaaactggaagactatcgcaag
ccagagaacgttgtcttaatgctacagacgatctactatgaggcgggcttcctgttgtgt
gtgagtctgggctgtgtattcctggtgttgacccccgtggtaggactgtgtttctgtgtg
tgtcgctgctgtgagaactgtggaggggagatgcaccagagacaggggaagaacccagac
tgtcagagaggattctacacggccgctctcatcaccacctccatattcatcacgactggg
gtgctgatagcgcatgctgccaaccacaacatcacgtctcagatcaagtcaacacgccgt
ttcatcagcaccaacatgagagacctgaagaccttcgctaacaacacaccggcgcaaatt
gaccatctgacggcccagtacactacagctaagaataaagtcctgtctgacctggacaac
atcgggcctctgttgggtgggaggatccagactcagctggagaaggaggtagttccttct
ctggacacagctctgcgcatggctggaggcaaagtggagaacgccgttaaagctctgcgt
gagtctaaggaggcgttggagagtgttagttcttcgttggatgttcttcatgagggaacg
tctcgtctggcgctccgtctgacgtatgaacggacctccctgtccaacaccctgtctgat
ccggcctgcactaacggagctgtgtcacgcacctgcaacaacatccgcattacactccca
cagctgggaatcaacagcaacttctctgggttaccagacgtcagtccccagttggccagt
ttagagattgccctgaagacagacctcagcaacattttacagaagggttattcatccttc
aatgacacccccagactggtccaacagcagactaagaatgtagtagcagctctgcctaga
gtgaaggccatgctggataaaataggagtagagattataggtttctctaagatgttccca
gtggaagcatctctggccaacttcaccatcttcctgagtcagggccagaagaacatggag
gcctactaccctcagatagaccagatggacttctacaggtggataggctgtgtggccgtg
ctgtgttcagtggttctggttttgacctttaacttcctgggtctgttgtgtggaacgtgt
ggctacgacaaacaggccacgcccaccacccgcggctgcctatcaaacaccggaggcaac
ctgctaatggcaggtgtagggttcagcttcatctttgcctgggtattgatggggctggta
tcagcagggtttgttgtcgggggcaacattgagaagctgttctgtgaaccgcttgctaac
agacaactgttcaagatcatagacactccctacatggtccatcctgccaagaagaacttc
ctgcctggcatgctgttccagaaccctaacatcaacctgactgtaggaagcatgtaccga
gactgctatgataacaacgggctgtaccatgccctgcagctggagacaatgttcaacatc
aacaccttcctcaaaacaaccgtgtttaacaaggacctggtgaaggtgtttgacagcgtg
agcatcgacctccagagcattgtgttattggagcaggatggacgggatgacctgctaacc
ttctctaacgctgggataggagatattaactatgctgcttacctagcagaggtgaataaa
ggtgtaactctggtggatctgctgtcattttccaacgagctggaggcccaggcagacctt
ctgccgcggggagctctagagaatgctttgaagggtcatgccagcagcatacgacagatc
cacagagaacaggtcgtccctatggagcaggccatgaaatttgtccgagcgcggagcacc
ctcagccagagcatccggctactgcagaggacagctaaggaactacctgtgaaggtgact
aacgtccttagtgccatcgacgaagcagagtacctcatcacacacaacgcttcacgcgtg
gttaaacaggagagagatgtgtacatgcagagcctggttggatacttcagacagtacaca
gactgggtcaaaaactctctgacaggggaggtgtctcagtgtaagcccatcagtaacatc
attgactccatggagatcgttgcctgcagcttcatagtcgactcagtgaacacgttctgg
ttcggtctgggtggttgctgtgtgttcctggttcccagcatcatcctgtcagtcaaactg
gccaagtactacaggaggatggatacggaggatgtgtttgaagagggccaagaaaactgg
tag
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