Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374591
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Entry
139374591 CDS
T10872
Name
(RefSeq) structural maintenance of chromosomes protein 2-like
KO
K06674
structural maintenance of chromosome 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139374591
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
139374591
Condensin II
139374591
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
139374591
NCBI-ProteinID:
XP_070971709
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All DBs
Position
19:complement(3405273..3458987)
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AA seq
1198 aa
AA seq
DB search
MHIKSIILEGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAA
NLQDLVYKNGQAGITKATVSITFDNANKSQSPLGFETHDEITVTRQVVIGGRNKYLINGV
NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILAMIEEAAGTRMYECKKIS
AQKTIEKKEAKLKEIQTILDEEITPTMQKLKEERSSYLEYQKLMREIEHLSRLYVAWLFV
CAEETKVKSAEDLKVMQDSISQLQANMADNEHKVQELSAQIQELQEKRDQEVGGVLKGLE
ETLSEVQRVHAKAQSAVDMKKQNLAEETKKRKELVKSMAEDKKILVVKEAEVSKVAEKLS
ALQEEGQKDSAALEAAQCHFKAVSAGLSTNEDGEEATLAGQMMTCKNDISKADTEAKQAQ
MKLKHAQQELKAKQTEVKKMDSGYQKDQEAFNTVKKNKEKLEADMGKLQYQDGKEEGLLD
RKRQLNREVTTLRNTYESLMSRFPNLRFDYSDPERDWDRSRVKGLLANLITVSDVCYSTG
LEVVAGGKLYNVVVDTEVTGKKLLEKGELKRRYTIIPLNKISARTLNDSVVNTAKSLVGE
QNVHTALSLVGYEADLRKAMEYVFGSTLVCDTLDNAKRVAFDKRVMTKTVTLGGDVFDPQ
GTLSGGARSQSASVLSSLQELREVQDSLSATETELQALDKQLSGLKGTAERYRLLKQQLD
MKTEELDILQVKLHQSSFHKQQEELKMLLKTIEECEETLRSSKEVQKKADEKYKVLENKM
QNAEAEREKELKAAQQKVNSAKTKADAFSKKLKERQQEAESLVLELEELKREQTGYEQQI
LAVDEAMKTIQEQIDNMSSTVAENKESVRKAQEELTRQKEVIVAQDKEIKGKSTEANHMR
ERTNESQLKIKELEHNINKHRKDSQEAAAKVSRMLEEHEWISQERGLFGQPNTGYDFKVN
NPKEAGQRLRKLEESKTRLERSVNKRAMNMLSQAEERYNDLMKKKRIVENDKSKILQTIE
ELDQKKKEALNIAWQKVNKDFGSIFSTLLPGADARLAPPEGCGALEGLEFKVALGNTWKE
NLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQMLRTHFTHSQF
VVVSLKDGMFTNANVLFKTKFVDGVSAVSRTTQAQPDQNKGPRKGPSHRPQAQKRIAN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaaatctattatcttagaagggttcaagtcctacgcgcagaggacggaaatc
aacggatttgatccgctcttcaacgctattaccggactcaacgggagtggaaaatccaac
attctcgactcgatatgctttctactggggatatccaacttgtctcaggtgcgagcggcc
aatctccaggatttggtgtacaagaacggtcaggccggtatcaccaaagccaccgtgtcc
ataactttcgacaacgcaaacaagagtcagagtccgcttggattcgagacccacgacgag
atcacggtcacaagacaggtggtgataggtggtaggaacaagtacctgatcaacggggtg
aatgccaacaacaccagggtacaggatctgttctgctctgtaggactcaacgttaacaac
ccccacttcctcatcatgcaggggagaatcaccaaggttctgaacatgaaaccgcctgag
atcctagccatgatagaggaggcagcaggaaccaggatgtacgagtgtaagaagatcagc
gcccagaaaaccattgagaagaaagaagccaaactgaaagaaatccagacgatcctggat
gaagagatcactcctaccatgcagaagctaaaggaggaacgttcttcatacctggagtac
cagaagttgatgagggagatagaacacctgagtcgtctgtacgtggcctggctgtttgtc
tgcgctgaggagaccaaggtgaagtcagcggaggacctgaaggtgatgcaggactccatc
agtcagctgcaggccaacatggcagacaacgaacacaaggtccaggaactctccgcccag
atacaggaactgcaggagaagagagaccaagaggttggtggagtgctgaaggggttagag
gagactctgtctgaggtccagcgggtccatgctaaagcccagagtgctgtggacatgaag
aaacagaacctggcagaggagaccaagaagaggaaggaactggtgaagagcatggcggag
gataagaagatactagtggttaaggaagcggaggtgtccaaggtagcagagaagctgtct
gccctacaggaggaaggtcagaaggatagcgccgccctagaggcagcacagtgtcacttc
aaggctgtgtccgcaggcctgtccaccaatgaggacggagaagaggccacgctcgccgga
cagatgatgacctgcaagaatgacattagtaaagctgacaccgaggccaaacaggcccag
atgaagctgaaacatgcccagcaggagttgaaggccaagcagactgaggtgaagaagatg
gactctggttaccagaaagaccaggaggccttcaacactgtcaagaagaacaaggagaaa
ctagaggctgatatggggaaactacagtaccaagatgggaaggaggagggtcttctggac
aggaagagacagctgaaccgtgaggtcaccaccctcagaaatacctacgagagtctgatg
tcccgcttcccgaaccttcgcttcgactacagtgacccagaacgtgattgggaccggagc
agagttaaggggctcctagctaacctgataacagtcagtgatgtgtgctactctactgga
ctggaggtggtggctggagggaaactctacaatgttgtggtggacactgaggtgacaggt
aagaagttattggagaaaggagagctgaagcgtagatacaccatcatccccctcaacaag
atctctgccaggacactcaatgacagcgtggtcaacacagccaagagtctggttggggag
cagaacgtccatacagcgctgtctctggttggctatgaggcagacctgaggaaggccatg
gagtacgtgtttggttctacgttggtgtgtgatacattagacaacgccaagcgagtggcc
ttcgacaagagagtcatgaccaagactgttactctgggaggagacgtcttcgatcctcag
gggacgctgagcggaggagcccgttcccagtcggcctccgtgttgtccagtctccaggag
ctgagagaggttcaggacagtctgtcagccacggagacggagctacaggccctggacaaa
caactgtctggtctcaaggggaccgctgagaggtatcgtttgttaaagcagcagttagac
atgaagacagaagagttagatattctccaggttaaactccatcagagctccttccataaa
caacaggaagaactgaagatgttactgaagaccattgaggagtgtgaggagaccctgcgc
agcagtaaggaggtccagaagaaggcagatgagaagtacaaggtgttggagaataagatg
cagaatgcagaggcagagagggagaaggaactgaaagctgctcaacagaaagtaaactct
gctaaaaccaaggctgacgcgttcagtaagaaactgaaggagagacaacaggaggctgag
tcgctggtcctagagttggaggagttgaagagggagcagactggctatgaacaacagatc
ctggcagtagacgaagccatgaagacgatccaggaacagattgacaacatgtcctccact
gtggcagagaacaaggagtctgtgcgtaaggcccaggaggagttgactagacagaaagag
gtgatcgtagcccaggacaaagagatcaagggtaaaagtacagaagccaaccatatgaga
gagagaaccaatgagtctcagttgaagattaaagagttggaacacaacatcaacaaacac
cgtaaagacagtcaggaggccgctgctaaggtgtctcgtatgttagaggaacacgagtgg
atcagtcaggagagaggcctgttcggccagcccaacacgggatacgacttcaaggtcaac
aaccctaaagaggcgggccagaggctgaggaagctggaagagtccaagacacgactggag
agatctgtcaacaagagagccatgaacatgttgagtcaggctgaggagaggtataatgac
ctgatgaagaagaagaggatcgtagagaatgacaagtctaagatcctccagaccatagag
gagctggaccagaagaagaaggaggccctcaacatcgcctggcagaaggtgaataaagac
tttggcagtatcttctccaccctgctgccgggggctgatgcccgtctggcccctcctgag
ggctgcggggccttagagggcctggagttcaaggtggctctgggaaacacgtggaaggag
aacctcactgaactcagcggaggacagaggtctctggtagccttgtctctgatcctggcc
atgctcctgtttaaacctgctcccatctacatcttggacgaagtggatgctgccctggac
ctctcacacacacagaacataggacagatgttgaggacacacttcacacactcccagttt
gtggtggtctctctgaaggacggcatgttcaccaacgccaacgttctgttcaagaccaag
tttgtagacggggtgtctgccgtgtcccgtaccacccaggcccaaccagaccagaacaag
gggccgcggaaaggcccgtctcatcggccgcaggcacaaaaaagaatcgctaactag
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