Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374686
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Entry
139374686 CDS
T10872
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like isoform X1
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139374686
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
Others
139374686
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_7
SAM_1
SAM_PNT
EpsI
Motif
Other DBs
NCBI-GeneID:
139374686
NCBI-ProteinID:
XP_070971851
LinkDB
All DBs
Position
19:8187110..8197809
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AA seq
1804 aa
AA seq
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MSDTTVSPEGAESGKSEHVRQWLHSSPTAPQEYNEDVAESSLLCPGKQGLVAQEERAESP
SCLSMKSDHSMGQPINFHRGHGTRDKREGAESPTSSCVSMRSDRSMDPPINYKREFIPNR
REGADSPTPSYLSMKSDQSMGPSSRMMTSDTTQLSIGGVHATMHTEHHGMNRVSNLREFP
QRIEDWTKEHVKEWLISSLKLPEVATKLYEQDVSGASLVCIEKQDLTDFGVKFGPAIQII
KNVEILRNDLESVGRSMRSPESDPFRRQERFRFRAIPEARMGSHEETQDSDSVKSESVAP
SLSSSWTSVEELRHSGSDVASPILLPMVESEYIPAYGNMEDNTRQSETSISSFDHLRETA
PNLEKRICPPRPFDQNDLSFTYIQNDILPPESGPSNLIDPVHEYKLLPSTEEASEIDILE
KFSNEVFRFSAACMNSRTNGTIHFGVTGGLGHMHGQVIGQNLPSFNMYTDRFDLHLKEHF
GEETNIARSCIRPPKFFQVQCLDGATSDKWVIEVDVVPSYSQTQEKLFYTSIIPEQNGEE
YKTECLFIRQGPKSINILADNNPRSLQEKMRGLTEEVKCWSSARKSKEESNCQQPNQNHQ
GQRLKQLITHGRDTLENSLQVIVVTNKCHPSQHEHLGFLKEMKLFAVLEFDPESDMNGTC
SFYRTDRIANLHYPRMYNTNDNVSSVIGKLNLFKQTSWVFCNGRANEVSEADRPFSTSEW
LKKRAGEISDMVSFLCNPDVLSKDRLLVVFMLHSGVTDISSPILEAFCAIYRTLEGEDNM
LCICKDSNVFSQWRDMINTRCKVDITSKCIYELSLTEIDCTIRKIKEPQTRSSRRYLPSS
GSSSVLLTQKDEELMTVLDILSENECENTEIETKDSFEEFKTNTEEDFYRGGQVTWWNFY
LSERPGCLPFIKRDKYEDLHNLITPTEGYTSPCIIINLFHHPGCGGTTLAMHVLWNLRCK
FRCAVLKNTTAQNSEIAVQVRHLLTCGKEKQLSYSPVLLLVDNWEDVEDLQRCILSAANE
KKKPDTLMVIILNCERSQIPAESSRNSRLDNVFMINKLSTKEQSFFEVKLKELKGHHQKP
ETFYAFMIMTNNFSEKYIKNLVCNTLKDLDTSRKEGQLFSLLALLNTYVNGSYMALSLCE
DFVGIRNALWGKETLEDKMNPYSTLLIRFNIKERGTYQAVRFLHQMIASNCLKVLTGKHK
LQLGEITTSLLHCDLLYKSGMGKDILVQNIQSMLITRQRKELGHDKDTLFSPLIEDIQTD
EGISQIKEVLVRATMRFDKNATLPQALARHFYLKEKDYISALQWAKDAQQKMYNSYIADT
LGQVYKSHLKYEIERAEELTPEGLDKCLKLAFQATKAFRDSQELAKKDEPMDSLDLPNRK
RQRTYNTSGYVGEMEVSMIVFDILKDIPFFNKSDELQRDKMLQFLKNHLPVSDFHETTNS
TNDQFIAVLSDHEKFLVSLKPRLKEMFSFFENYFTYLKPRSIEKETAEDRNKRKVSELFK
KYIHIFCSSGEERASERASKPKLSLRQEIEEQRNYLEQKRADSFAGLLQYLNEKNGNQIE
LILKKWQFIVQNSTRKLMADRINFILANIVLHCIKQSSTLLKRYEDLVSLLNEALQEEGT
HSNCTELYYLSMLLMWPRKDNLLESTTTFKNIGTYVTSSKKSFHRRFSHMFPAKSCIAHF
YLGKSRGLRRIIHKGRLDQFLYKEGPKTSHKKASSKDRPPNPHQLWQSGAIWRDPEIQNL
LQRVKGKTENGDIYVYYGGNLKISVRPVYLGGVRSGCSTEEVSFYLGFTMEGPVASDIKY
ENDR
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccactgtatcgcctgagggtgcagagagtgggaagagtgaacatgtccgc
caatggctgcatagtagtcccactgccccacaggagtataatgaggacgttgcagaatca
agtcttctctgccctggtaaacagggcttggtggcccaggaggagagagcagagtcacct
agctgtctgtcaatgaagagtgatcactcaatgggtcagccaatcaacttccaccgagga
catggcacaagggacaaaagggagggtgcagagtcacctacatccagctgtgtgtcaatg
aggagtgaccgctcaatggatccaccgataaactacaagagagagtttattcccaatcgc
agggagggagcagactcacctacgcccagctatctgtcaatgaagagtgaccagtcaatg
ggtccatcttcaaggatgatgacatcagacacaacacaactgtccattggtggagtgcat
gcaacaatgcatactgaacatcatggcatgaacagagtcagcaacctcagagaattccca
cagagaatcgaagactggacgaaggagcatgtgaaagagtggctaattagtagcctcaaa
ctccctgaggtcgcaacaaaactttatgaacaggacgtgtcaggagctagcctggtttgc
attgagaaacaggacttgactgatttcggtgttaagtttgggcctgcgattcaaatcata
aaaaatgtagagatactgagaaacgacttggagagtgtagggagaagcatgagatcccct
gagagtgaccccttcagaagacaggagagatttagatttagagccataccagaagctagg
atggggtcacatgaggaaactcaggattctgacagtgtgaaatcggagtcggtggctcca
agtctaagctcatcatggacatcagtggaagaactgagacattccggttcagatgttgca
tcccccattctactgccaatggtagagtcggaatacattccagcttatggaaatatggag
gacaatacgagacaaagtgagacgtccatctcatcatttgaccacttaagagaaactgct
ccaaatctggagaagagaatatgtcccccacgtccctttgaccaaaacgacctatcgttc
acatacatacaaaatgatatcctcccccctgaatctggtccaagcaatctcattgacccg
gtacatgagtacaagctcctgccaagcacagaggaagccagtgagatagatattctggaa
aagttcagcaatgaagtgtttcgtttttccgcagcctgcatgaactctcgcaccaatggt
acaattcattttggggtgacaggcgggctcggacacatgcatggacaggtgattgggcaa
aacctgccatcattcaatatgtatacagacaggtttgacttgcatctcaaggaacacttt
ggagaagaaacaaatatcgcaagatcatgcatcagacctccaaaattctttcaggttcaa
tgtctagatggcgcgacttcagacaagtgggtgatagaagttgatgttgtcccaagttat
tcacagactcaagagaagcttttctatacctcaataatacctgaacaaaatggagaagaa
tacaaaactgaatgtctgtttattcgacaaggtccaaagagcatcaacattcttgcagac
aataatcccagaagtctacaggagaagatgagaggtttgacagaggaagtcaaatgttgg
tcatcagcacgcaagtcaaaagaggagagcaactgtcagcaacccaaccaaaaccaccaa
ggtcagaggctaaaacaattgataactcatgggagagacacacttgaaaactcattgcaa
gttatagttgtcacaaacaagtgccaccccagtcaacatgaacatttgggttttttgaaa
gagatgaagttgtttgcagtgctcgagtttgacccagaatctgacatgaacgggacatgc
agtttctacagaacagatcgcatagcgaatcttcattaccctcgaatgtacaatactaat
gacaatgtctccagtgttatcggaaagctgaacttgtttaagcagacaagctgggtcttt
tgtaatggtcgagcaaatgaggtcagtgaagcagacagacctttcagtaccagtgaatgg
ctgaagaaacgtgctggagaaatcagcgatatggtttcatttctctgcaatccagacgtc
ttgtcgaaagacagactacttgtggtgttcatgcttcactcaggagtcactgacatctca
agccctatacttgaggccttttgtgcgatctatcgcactcttgagggtgaggataatatg
ctctgcatatgcaaagattccaatgtattcagtcaatggagagacatgataaacactcgc
tgcaaagtggatattactagtaaatgtatctacgaattgagcctgactgaaatcgactgc
accatcaggaaaatcaaagaaccccagacacggtcctctaggagatatctgccatcttct
ggctccagttcagtcctcctgacacaaaaagacgaagagctgatgaccgtacttgatata
ctgagtgaaaatgaatgtgagaacactgaaattgaaaccaaagactcttttgaggaattc
aagaccaacacggaggaggacttttacagaggcggacaggtgacttggtggaacttctac
ttgtccgagaggccaggttgtctgccattcatcaaacgtgacaagtatgaggatcttcac
aacctgatcacacctacagaggggtacacatcgccatgcataataataaacctcttccat
catccaggatgtggtggaacaacactggccatgcacgtgttgtggaacttgagatgtaaa
ttcagatgtgccgttctgaaaaacaccacagcacagaacagtgagatcgcagtccaagtc
agacacctgctgacctgtggcaaagagaagcagttgagttattctcctgttctactcttg
gtggacaactgggaggacgttgaagacctacagagatgcatactaagtgcagccaacgag
aagaagaaacctgacactctgatggtcatcatactgaactgtgagagatcacagattcct
gcagagagctccagaaacagccgacttgacaatgtgttcatgatcaacaagctctccacc
aaagagcagagcttctttgaggtgaaactgaaagagctcaaaggtcaccatcaaaaacct
gaaacgttctacgccttcatgatcatgacaaacaatttcagtgagaagtacatcaagaat
ctggtgtgcaacaccctgaaagaccttgacacctccagaaaagaaggacagctattttca
ctcttagctttgctaaatacatatgtgaacggctcctacatggccctgtccctatgtgag
gattttgtggggattaggaatgctctgtggggaaaagagacacttgaggacaaaatgaac
ccatactccacgctactgatccgcttcaacattaaagagcgcggcacttatcaggcagtt
cggtttctacaccaaatgattgcaagtaattgcctcaaagtcctcaccggaaagcacaag
cttcaactgggggaaataacaaccagtctgttacactgtgacttgctgtacaaatctggc
atgggtaaggacatcctggttcaaaacatccaaagtatgctgatcacgcggcaacgaaag
gaacttggacatgacaaagatacactgttctctcctttgattgaagacatacagacggat
gagggaatcagccaaatcaaagaagttcttgtaagagcaacaatgagatttgacaaaaat
gcaactctgccacaagctttggcaaggcatttctatctgaaagagaaggattatatatct
gctctgcaatgggccaaggatgcacagcagaaaatgtacaattcttacattgcagacaca
ttgggacaggtgtacaaaagccacctgaaatatgaaattgaacgtgctgaggagctcact
ccagaagggttagacaaatgcctaaaattagcatttcaggccaccaaagcattcagagat
tcacaggaactcgcaaagaaggacgagccaatggattcccttgatctgcccaacagaaag
aggcaacgaacctacaacacatctgggtatgtcggtgaaatggaagtttcaatgattgtt
tttgacatcctcaaagatattcctttcttcaacaaaagtgatgaactccagcgagacaaa
atgctgcagttcctcaaaaaccacttgccggtgagtgattttcatgaaacaacaaacagt
acaaatgatcaattcattgctgttctgtcagaccacgagaaattcctggtctctttgaag
ccacggctgaaggagatgttcagtttttttgagaactacttcacatacctgaagccaagg
tcaattgagaaggagacagcagaggacagaaacaaacgaaaagtatcagagctcttcaag
aagtacattcacatcttctgttcctcgggagaagagagagcctccgaaagggccagtaaa
ccaaaactgagtctccggcaggagatagaggagcagcggaactatttggagcaaaaacga
gcagattcatttgctggtcttctccagtatctgaatgagaagaatgggaatcaaattgaa
ttaattctgaagaaatggcagttcattgttcaaaattctacacggaaactcatggctgac
cggatcaatttcatccttgcgaacattgttcttcactgcattaagcaaagctcaacattg
ctgaagaggtacgaggatctggtctcccttctcaacgaggcactgcaagaagagggaacc
cattcaaactgcacagagctgtactacctctcaatgttgctgatgtggccaagaaaggac
aacctgcttgagagcaccacaacgttcaaaaacattggcacgtatgtcacttcatcgaaa
aaatctttccatcgtcgcttctcccacatgtttccggcgaagagttgcatcgcacatttc
tacctcgggaaatcaagagggctgaggagaataattcacaaaggcaggcttgatcagttc
ctgtacaaagagggacccaaaacatcacacaagaaggcctcatccaaagatagaccccca
aacccgcatcaactgtggcaaagtggagcaatatggagggatcctgagatacaaaacctg
ttacagcgggtcaaaggcaaaacggaaaacggtgacatttatgtttactacgggggcaat
ctgaaaatctcagtgcgtccagtataccttggtggagtccggagtggatgcagtacggag
gaggtctccttttaccttggattcaccatggagggacccgtagcttctgacataaagtat
gaaaatgaccggtaa
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integrated database retrieval system
