Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374703
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Entry
139374703 CDS
T10872
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
139374703
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
139374703
RSF complex
139374703
WICH complex
139374703
B-WICH complex
139374703
NORC complex
139374703
BRF complex
139374703
NuRF complex (fruit fly)
139374703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139374703
NCBI-ProteinID:
XP_070971902
LinkDB
All DBs
Position
19:9916408..9926444
Genome browser
AA seq
1032 aa
AA seq
DB search
MSETGNGVELREERAVELEETGGVEEKDDASEASKEESSEAGQDAQDEDPSSSTAPAYEE
KVASDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDNR
HRRTEQEEDEELLSESSKTTNVCTRFDESPSFVKGGTMRDYQVRGLNWLISLYENGINGI
LADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIG
DREQRNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSE
IVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVE
RLHTVLRPFLLRRIKNEVEKSLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMD
KMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMAVLDKLLPKMKAQGSRV
LIFSQMTRMLDILEDYCMWRNFGYCRLDGQTPHEERQISINAYNEENSPKFIFMLSTRAG
GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAE
MKLQLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESDITDDDIDEILERGE
KKTMELKEKMNTMGESSLRNFTMESDNSVYTFEGEDYREKKKVVTNWIEPPKRERKANYA
VDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRN
PELPNSSQHQKEEQAKIDEAEGLSEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRD
DIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDT
KIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFEKESVYDELRQCIRNSPQF
RFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKKGPRSQSSAQKRKGDGTP
DPRGGRRKKLKL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagactggaaacggcgtggagctgcgggaagagcgagcagttgaacttgaagaa
accggaggagtggaggaaaaggatgatgcgtcagaggccagcaaggaggagtcttctgaa
gccggacaggatgcccaagatgaggacccctcttcatctacagcgccagcctatgaggag
aaagtggcatcagaccggaccaacagatttgagtacctactgaagcagacagaggtgttt
gcccatttcattcaacctgcggcccagaagacccccacctccccgctcaagatgaagcca
ggacgtcctcgtgtcaagaaggacgagaaacagaatctcctctcggtcggagataaccgt
catcgtcgcacagagcaggaagaggatgaagaactgctgagcgaaagcagcaagaccacc
aacgtctgcacccgcttcgacgaatctccctcctttgtaaaagggggtacaatgagagac
taccaggtccgtggtctgaactggctcatctctctgtacgagaacggaatcaatgggatt
cttgctgatgaaatgggtttgggtaagaccctgcagaccatctctctgctggggtacatg
aagcactacaggagcatccccgggccccacatggtgctggtgcccaagtccaccctgtac
aattggatgaacgagttcaaacgttgggtcccctccctcaaagcagtctgcctcatcgga
gaccgagagcagaggaatgccctgatcagagatgtgctgctgccaggtgagtgggatgtg
tgtgtcacctcttacgagatgctcatcatagagaaggccgtgttcaagaagtttaactgg
aggtacctggtcatcgacgaggcccacaggatcaagaacgagaagtcaaagctgtcagag
atagtgcgtgaattcaagaccaccaaccgtctgctgctaaccggcaccccgctgcagaac
aacctccacgagctctgggccctgctcaacttcctgctgccagacgtcttcaactcctca
gaggactttgactcatggtttgacaccaacaactgcctgggggatcagaagttggtggaa
cgtcttcacactgtactgcgtcctttccttctgcgtcgtatcaaaaatgaggtggagaag
tctctgctgcctaagaaagagatcaagatgtacgtggggctgagtaagatgcagagagaa
tggtacaccaagatcctgatgaaggacatagacatcctgaactctgcagggaagatggac
aaaatgcgcctgctcaacgtcttgatgcagctgaggaagtgctgcaaccacccgtacctg
tttgacggggccgagcccggcccgccttacaccaccgacttgcacctggccgtcaacagc
ggcaagatggccgtccttgacaagctgctgcccaagatgaaggctcagggctcccgtgtg
ctgatcttcagccagatgaccaggatgctggacatcttggaggactactgcatgtggcgc
aacttcggctactgtcgcctggacggacagacgccccacgaggagagacagatctccatc
aacgcgtacaatgaggagaacagccctaagttcatcttcatgttgagcaccagggccgga
gggctgggtattaacctggccacagctgacgtggtcatcctctacgactcagactggaac
cctcaggtcgacctacaggccatggaccgagctcacaggattggtcaaaagaagcaggtg
cgcgtgttccgtttcatcacggaaaacacagtagaggagaggatcgtggagcgagccgag
atgaagctccaactggactccatcgtcatccagcaaggaaggctagtggatcccaatgcc
aacaagctggggaaggacgagatgctgtctatcatccggcacggcgccacgcacgtcttc
gcctccaaggagagcgacatcaccgacgatgacatcgacgagatcctggagcgaggcgag
aagaagaccatggagttgaaggagaagatgaacaccatgggcgagagctccctgaggaac
ttcaccatggagtccgacaacagtgtgtacaccttcgaaggagaggactacagggagaag
aagaaggtggtcaccaactggatcgagccacccaagagagagaggaaggccaactacgca
gtggatgcctacttcagagaggccctgcgtgtcagcgagcccaaagcacccaaggctcct
cgtccacctaagcagcccaatgtgcaggacttccagttcttccccccaaggctgtttgaa
ctgctggagaaagaaatcctattctacaggaagactatcggctacaaggttcctcgtaac
ccagaactgcccaactcgtcccagcaccagaaggaggagcaggccaagattgacgaggcc
gaaggcctatcagaggaggagctggaggagaaggagaacctcctctcgcagggcttcacc
atctggaacaagcgtgactttaaccagttcatcaaagccaatgagaagtgggggagagac
gacatcgagaacatcgccagagaggtggagggcaaaaccccagaggaagtcatggaatat
tccgctgtgttctgggagcgttgcaacgagctgcaggacattgagaagatcatggctcag
atcgagaggggagaggcccgcatccagaggaggatcagcatcaagaaagcactggacaca
aagattggtcgctacaaggcgccgttccaccagttgaggatctcgtacggcaccaacaag
gggaagaactacacggaggaggaggaccgcttcctcatttgcatgctgcacaagttgggc
ttcgaaaaggagtcggtctacgacgagctgcgccagtgcatccgcaactcgccccagttt
cgcttcgactggttcctcaagtccaggaccgccatggagctccagaggcgatgcaacacc
ctgatcaccctgattgaacgagagaacatggagctggaggagagggagaaggcagagaag
aagaagaaaggaccacggagtcagtcttctgctcagaagcgtaagggagacgggacccca
gacccgcgaggaggccgcaggaaaaaactaaagctgtga
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