Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374713
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Entry
139374713 CDS
T10872
Name
(RefSeq) retinal homeobox protein Rx1-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139374713
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139374713
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
139374713
NCBI-ProteinID:
XP_070971964
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Position
1:17955654..17971685
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AA seq
323 aa
AA seq
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MHLSLDTMSVVDDSCLSPSNFHEMVKGGGVAMGGRVHSIDVILGFSKDQDPLLTPSEGPG
PHKVGVDGLGDPGKQDLSHPYGHLSEQRSYHDSVLYSDKCDGDMSELRKNVDSNGGKSPV
PCEEERPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQ
NRRAKWRRQEKLDATTMKLHDSPMLSFNRPPMHSNMGPMSNSLPLDPWLTSPLSSVTPVH
SIPGFMGTGQGLQGGYPSHSFLNSPSPMGQGMQSMTPPPYQCSGPFTDKYPMEDVDQRSS
SIAALRMKAKEHIHSMDKTWQPM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcattggataccatgagtgtggtggatgacagctgcctctcgcccagtaac
ttccacgagatggtgaaaggagggggggtggcgatgggcggccgcgtccacagcattgat
gtcatcctgggcttcagcaaagaccaggaccccctgctcaccccctctgagggtccagga
ccacacaaagtgggcgtggatggccttggggaccctgggaagcaggacctgtcacacccc
tatgggcacctctcagaacagaggtcctatcatgattcagtactgtactcagataagtgt
gatggggacatgagtgaactgaggaagaatgtggacagcaacggtgggaagagtccagtg
ccctgcgaggaagagcggcccaagaagaagcaccggcgcaaccgcaccacctttaccacc
taccagctgcacgagctggagcgtgcctttgagaagtcccactaccctgatgtgtacagc
cgtgaggagctggccatgaaggttaacctccctgaagtcagagttcaggtttggtttcag
aaccgcagagccaaatggaggcgccaggagaagcttgacgccaccaccatgaagttgcac
gactcacccatgctctcatttaaccggccgcccatgcacagcaatatggggcccatgagc
aactccctccccctggacccttggctgacctcccctctgtccagcgtcaccccagttcac
agcatcccaggcttcatgggcacaggccagggactgcagggaggctaccccagccacagc
ttcctcaacagcccttcaccaatgggccaggggatgcaatccatgacacctcctccgtac
cagtgttccggtcccttcaccgacaagtatccaatggaggacgtggaccagaggagctcc
agcatcgcagcgctgaggatgaaagccaaggaacacatccattccatggacaaaacctgg
cagcccatgtga
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