Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374718
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Entry
139374718 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein 10-like
KO
K13736
Rho GTPase-activating protein 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139374718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139374718
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139374718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
RhoGAP
SH3_9
PH
SH3_2
SH3_1
Arfaptin
IMD
BAR
PXA
ComGG
Motif
Other DBs
NCBI-GeneID:
139374718
NCBI-ProteinID:
XP_070971928
LinkDB
All DBs
Position
19:10789911..10858265
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AA seq
756 aa
AA seq
DB search
MGLHPLEFSECYLDSPVFREKIKAHEAELDKTNRFIKELYKDGKNLINATKQLALAQRKF
AQSLGEFQFEYIGDAKTDDERCIDESLQEFSNFLKNLEDQRELMMRNITETLMKPLEKFR
KEQLGSAKAERKKYEKETEKYYSSLEKLLNMSAKKKEPQLQEADSQVETIRQHFQEESLD
YVCKLQEIQERKKFDCVEPMLAFFQTVFTFYHQGFELANDFNHYKKALQINIQNTRSRFE
GTRVEVFELMKRIREVPQEYRQTSPISSEGYLYVQEKRPPPFGSSWVKRYCTFVKEQKIL
HMVTFDHRSGGKMGETESVTLKSCVRKTTDMLDRRFCLDIEITDRPGTVLTVQSLSEDDH
KFWIHAMGGKEPAGQYLGKTFSKERGIDAQLDDVGLSFVKNAINAIETRGINDQGLYRVV
GVSSKVQKLLSLMIDEKSNDVDLSTCEDWDVKTITSTLKLYLRSLPEPLMTYGLYKDFIA
PAKGGSPESRSQAIHCLVHKLPEKNRLVLGLLMKHLATVAAHSKLNLMTVANLGVVFGPT
LMRPQEDTVAAIMDLKFQNIVVEILIEQHEKIFGDVPGPSSPGLSAPTRQSKKLSVRQNR
PLAVYNPKTVDLQTVLPTSPDVCSNSDEASLGSNESVSSQSTASGTPPEKANHAPLLASL
STDSPGACIAVAASWLNSGALTKASSDGDKTVDGVTGGGGKRAMAVYPCEAEHESELSFQ
VGAIFSAVAPSREPGWLEGELEGKKGLIPENYVEML
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgggattacacccgttggagtttagcgaatgctacctggacagtcccgttttcagggag
aaaataaaggcacacgaggcagagttggacaaaaccaacagatttatcaaagaactctac
aaggatggaaagaatctcatcaatgccacaaaacagcttgcgttggcccagcgcaagttt
gcccagtccctgggagaattccagtttgagtacatcggcgacgcgaagaccgacgatgag
aggtgtattgatgaatccttgcaggagttctccaacttccttaagaacctggaagaccaa
agagagctgatgatgaggaatattacagaaacgctaatgaaaccgctggagaagttcaga
aaagagcaactgggctcagccaaggcggaaaggaagaagtatgagaaggaaactgagaag
tactacagctccttggagaagcttttgaacatgtcagcaaagaagaaggaaccgcagcta
caggaggcagacagccaggtagagaccattagacagcacttccaggaggagtctctggac
tacgtgtgcaaactgcaggagatccaggagaggaagaagtttgactgtgtggagccaatg
ctggcgttctttcagacagtgttcaccttctaccaccagggatttgagctggccaatgac
tttaaccactacaagaaagccttacagatcaatatacaaaatacacggagtcggtttgag
ggcacgcgggtggaggtgtttgagctgatgaagaggataagggaggttccccaggagtac
agacagaccagccccatcagcagcgaaggatacctctacgtccaggagaaacggccccct
ccttttggttccagttgggtgaagcgttactgcacgtttgtgaaggaacagaaaatccta
cacatggtcacctttgaccacaggtcaggaggaaagatgggcgagactgagtcggtcacc
cttaagtcttgtgtccgcaaaaccacagacatgctggacaggcggttctgtctcgatata
gaaatcacagaccgaccgggaacggtcctcacggtccagtcgctgtcggaagatgaccac
aagttctggattcacgccatgggtgggaaagaaccagctgggcagtacttgggtaaaacc
ttttcaaaagaacgtggaatcgatgcacagctagatgacgtaggattgtcatttgtgaag
aatgccatcaacgccattgagacgagaggtatcaatgaccagggcctgtacagagtggtg
ggggtcagctccaaagtccagaagctccttagcctaatgatcgatgagaagagtaacgat
gtggatctgtctacgtgtgaggactgggatgtgaaaacaatcaccagcacgctaaagctg
tatttgaggagtcttcctgagccactgatgacctatggactctacaaagactttatcgcc
cctgcaaagggtggtagtccagagtctcgtagccaagccatccactgcctggtccacaag
ctgcctgagaagaaccgtctggtcctggggctactgatgaaacacctggctactgtggcg
gcccacagtaagttgaacctgatgacggtggccaacctgggtgtggtgtttggtcccacc
ctgatgaggccccaggaggatactgtggctgccatcatggacctcaagttccagaacatt
gtggtggagatcctcatcgaacaacacgagaagatctttggagatgtcccaggcccgtct
tccccagggctctccgcccccaccaggcagtccaagaaactgtcggttcgacagaaccga
ccccttgccgtctataatccaaagaccgtggacctgcagacggtgttaccgacatcacct
gatgtctgttccaactcggatgaggcgtcgctcggcagcaacgagtcggtgtcgtcccag
tcgactgcctcggggacgcctccggagaaggccaaccatgctccccttctcgccagcctc
agcacagacagcccaggggcctgcatcgctgtagcagcctcgtggctcaactctggagcc
ctgaccaaagccagttctgatggggacaagacagtggatggtgtcaccggtggcggcggc
aagagggccatggcggtgtacccgtgcgaggccgagcacgaatctgagttatccttccag
gtcggagcaatattcagcgccgtggcaccttccagagaacctggctggctggaaggagag
ctggaggggaagaaaggcctcatccctgaaaactatgtggagatgctgtag
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