Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374910
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Entry
139374910 CDS
T10872
Name
(RefSeq) catenin alpha-2 isoform X1
KO
K05691
catenin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139374910
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139374910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139374910
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139374910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
PipB2_N
Motif
Other DBs
NCBI-GeneID:
139374910
NCBI-ProteinID:
XP_070972231
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All DBs
Position
19:19844683..20522501
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AA seq
905 aa
AA seq
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MTTATSPILLKWDPKSLEIRTLTVERLLEPLVTQVTTLVNTSNKGPSSKKKGRSKKAHVL
ALSVEQATQNFLEKGEQIAKNSHDLKEELILAVEDVRKQGDSMRVASQEFADDPCSSVKR
GTMVRAARALLSAVTRLLILADMADVMRLLAHLKIVEEALEAVKNATNEQDLANRFKEFG
KEMVKLNYVAARRQQELKDPQCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRANR
DYVFKQVQEAIGGISSAAQATSPGDEKHGHAGIGELAAALNEFDNKIILDPLTFSEARFR
PSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRKEKGD
PLNSAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEKEVKEYAQV
FREHANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQD
NMDVFKDQWEKQVRILTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTA
GAIRGRAARVVHIINAEMENYEPGVYTERVLESIKLLSETVMPRFAEQVEVAIEALSTNP
PQPFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDARSRTSVQTEDD
QLIAGQSARAIMAQLPQEEKAKIAEQVESFRQEKCKLDAEVAKWDDNGNDIIVLAKQMCM
IMMEMTDFTRGKGPLKNSSDVINAAKKIAEAGSRMDKLARAVADQCPDSACKQDLLAYLQ
RIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVAST
KYAKVYGAAAVNSPVVSWRMKAPEKKPLVKREKPEECQTRVRRGSQKKHISPVQALSEFK
AMDSF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctacgtcccccatcctgttgaagtgggaccccaagagtctggagatccgc
accctgaccgtggagcggctgctggagcccctggtcacacaggtgaccaccctggtgaac
accagcaacaaagggcccagcagtaagaagaaggggcgctccaagaaggcccacgtgctg
gccctgtccgtggagcaggccacgcagaacttcctggagaagggcgagcagatcgccaag
aacagccacgatctcaaggaggagctcattctcgccgtggaggacgtccgcaagcaaggc
gattcaatgcgcgtggcctcccaggagtttgctgacgacccttgctcctcagtgaagcga
ggcaccatggtgagggctgcccgcgccctgctctccgccgtcacccgcctgctcatcctc
gccgacatggccgatgtcatgaggttgctggcccacctgaaaatcgtggaggaggccctg
gaggcagtgaagaatgccaccaacgagcaggaccttgccaaccgcttcaaagagtttggc
aaggagatggtgaagctcaactatgtggctgcccgcagacagcaggagctgaaagacccc
cagtgtcgggacgaaatggcagctgcgcgcggcgccctgaagaagaacgccaccatgctc
tacacggcctcacaggccttcctgcgccacccggacgtggcggccacgcgcgccaaccgt
gactacgtcttcaagcaggtgcaggaggccatcgggggcatcagcagtgccgctcaggcc
acctcgcccggcgacgagaagcacggccacgctggcatcggcgagctggccgcggccctc
aacgagtttgacaacaagatcatcctggacccgctgacgttcagcgaagcgcgtttccgc
ccctccctggaggagcgcctggagagcatcatcagcggcgccgccctcatggccgactcg
tcctgcacccgcgacgaccgccgcgagcgcatcgtggccgagtgcaacgccgtccggcag
gccctgcaagacctgctgagcgagtacatgaacaatactggcaggaaagagaaaggagac
ccgctgaactctgccatcgacaagatgaccaagaagaccagggatctgcgcagacagttg
aggaaggcggtgatggaccacatctccgactcgttcctggagaccaacgtgccgctgctg
gtgctcatcgaggcggccaagagtggcaacgagaaggaggtcaaggagtatgcgcaggtg
ttccgggagcacgccaacaagctggtcgaggtggctaacctggcctgctccatctccaac
aacgaggagggtgtgaagctggtgcgcatggccgccacccagatcgacagcctctgccca
caggtgatcaacgcggccctcaccctggctgctcggccccagagcaaggttgcccaggac
aacatggacgtgttcaaggaccaatgggagaagcaggtgcgcatcctcaccgaggccgtc
gacgatatcacttctgtggatgacttcctgtccgtgtcagaaaaccacattctggaggac
gtgaacaagtgcgtgattgccctgcaggaaggcgacgtggacaccctggaccgcacggcg
ggcgccatcaggggtcgggcggcccgcgtcgttcacatcatcaatgcggagatggagaac
tacgagccaggtgtttacaccgagcgcgttctggagtctatcaagctgctgtctgagacc
gtcatgccccgtttcgctgaacaggtggaggtggccattgaggcgctgagcacaaacccc
ccacagccctttgaggagaacgagttcatcgacgcgtcccgcctggtctacgacggcgtg
cgtgacatacggaaagccgttcttatgatcaggacacctgaggagctggaggatgactca
gactttgagcaggaggactacgacgcccgcagcaggaccagtgtccagacagaggacgac
cagctcatcgccggacagagcgccagggccatcatggcccagctgcctcaggaggagaag
gcgaagatcgccgagcaggtggagagcttccggcaggagaagtgcaagctggacgccgaa
gtggccaagtgggacgacaatggcaacgacatcatcgtccttgccaagcagatgtgcatg
atcatgatggagatgacggacttcaccagaggcaaagggcccctgaagaactcctctgat
gtcatcaacgccgccaagaagattgcagaggcaggctccaggatggacaaactggcccgc
gccgtcgccgaccagtgccctgactcggcctgcaagcaggacctgctggcctacctgcag
agaattgccctgtactgccaccagctcaacatctgtagcaaggtcaaggccgaggtccag
aacctgggaggagagctcatcgtctctgggctggacagcgccacctccctgatccaggcg
gccaagaacctgatgaacgctgtggtgctcacagtcaaggccagctacgtggcgtccacc
aagtacgccaaggtgtatggcgccgccgccgtcaactcgcctgtggtcagctggcgcatg
aaggcgcccgagaagaagcccttggtgaagcgggagaagcccgaggagtgtcagacgcgt
gttcgacggggctcgcagaagaagcacatctcgcccgtccaggccctcagcgagttcaag
gccatggactccttctaa
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