Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374941
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Entry
139374941 CDS
T10872
Name
(RefSeq) protein Smaug homolog 1-like isoform X1
KO
K27396
protein Smaug
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139374941
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139374941
NCBI-ProteinID:
XP_070972301
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Position
19:complement(23301893..23404607)
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AA seq
746 aa
AA seq
DB search
MMFRDQVGILGSWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCTELHVLEG
EANNPVVISQWQGEPKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGRHLE
ESRQLLSYALIHPATSLDDRAALALWLNHLEERAAARADSLERLPPSPASHHQTPPSTLS
SSGSSLGSSVGHLGHLYHHQRYGSDDRLNGWQGSRDSGLGSGWQQQGQGGCENGGHLALY
PSSSVPGSINTVGTGGSSNTILFGGGGGQHSPLKRSVSLTPPMSDGSLAGSSSLGLGHGW
LSQEDLRGPRGGGGLGLAPTDPHHAPLSPQSSVASSGSGGSEHLEDAGLGGGGCCGGSLY
RRSTFHKEGSGMRDVPAWLKSLRLHKYAALFSTMTYDEMMSLTEQQLESQNVTKGARHKI
VISIHKLKERQNMLRCLEKDVLEGGNLRAPLAELHQMILTPIKAVASDESLPSSTTQQPL
LSLEGKSSAAPGSHLAPGGGEGETGATLIAEGDIPGQFTRVMGKVCTQLLVSRPDEENIS
SYMQLIDKCLLHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDMAGYRAQRSSSSSRGF
SQSNSLPTAGCVGGSSSMSARRSLRQFQMPSRSLPGARLGLLGTAGLLGPTPRSASSTST
GLKQGRQGLWFANPGGSNSMPSRTHSSVQRTRSLPVHTTPHTMVMFQQSDLQVPVTEPDI
NNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtgggcatcctgggaagctggtttaaggggtggaacgagtgt
gagcagacggtggctctgctgtcgctgctgaagcgggtgtcgcagacccaggctcgtttc
ctgcagctgtgtctggagcacagcctggctgattgcaccgagcttcacgtgttggaggga
gaggccaataacccagtggtgatcagccagtggcagggtgagcccaaggagcgtgtcatc
tccctggtcctcacccacctgcccctgctcaagccgggcaacgtcgaagccaagggcgag
tacatgcgcctcctcccccgcatcctggcacacaccatcgagcacggccgccatctggag
gagtcgcgccagctcctctcctacgccctcatccacccggccacctcactggacgaccga
gccgcccttgccctctggctcaatcacctggaggaacgcgctgctgcccgggctgactcg
ttggaacgactgcccccctccccagcctcgcaccatcagacacccccctcaacgctctcc
tcgtcgggttccagtttgggttcctctgtgggccacctgggtcacctgtatcaccaccag
cgctacggctcagacgatcggctcaacggctggcaggggtcgagggactcggggttgggc
agcggatggcagcagcaggggcagggagggtgtgagaatggtgggcacctggctctctac
ccgtcctcgtctgtacctgggagtattaacacggtgggcacgggcggcagcagcaacacc
atcctgtttggcggcggcggagggcagcacagtcccctgaagcgttcggtgtcccttacc
cccccgatgagtgatggctccttggccggttcctcctccttgggtttgggtcatggctgg
ctctcccaggaggacctgcgcgggccccggggaggaggagggctggggctggcccccacc
gacccccaccacgcacccctctccccccagagcagcgtagcgtcttcgggtagtggcggc
agcgagcacctggaggacgcaggtctaggaggaggaggatgctgtggaggaagtttgtac
cgcaggagcacatttcataaggagggcagcggcatgagggatgtgccggcctggctgaaa
agcctccgtctccacaagtatgcggctctattctccaccatgacgtacgacgagatgatg
tcactgaccgaacaacagctggaatcacagaatgtcaccaaaggggcgcgccacaagata
gtcatcagcatccacaaactgaaggagcgccagaacatgctgcgctgcctagagaaggac
gtgttggaagggggtaacctgcgcgcccctcttgccgagctccaccagatgatcctgacg
cccatcaaggctgtggccagcgacgagtcgttgccctcctcgaccacacagcaacccctg
ttgagccttgaggggaagagcagcgccgccccgggctctcacctggcccccggaggaggg
gaaggggagacgggggctaccctcatcgccgaaggggacatccccggccagttcactcgc
gtcatgggcaaagtttgcacacagctcctggtgtccaggccagatgaagagaacatcagc
tcctatatgcagctcattgacaagtgccttctgcatgaggcgttcactgagacacagaag
aagcgcctgttgtcatggaaacagcaggtgcagaagctgttccgctcgttccccaggaag
actctcctggacatggcgggctaccgggcgcagaggagcagcagcagtagccggggcttc
agccagtccaactctctccccacggcgggctgcgtggggggcagcagtagcatgtcggcc
cgccggagcctgcgccagttccagatgccctcacggagcttgcccggcgccaggcttggc
ctgcttggcaccgccggcctcctgggacccacgccgcgcagcgccagcagcacctccacc
ggtctcaagcagggacgacagggtttatggtttgccaaccccggaggcagtaatagcatg
cccagccgaacccacagctcagtgcagaggacccgctccttgcctgtccacaccacgcca
cacaccatggtcatgtttcagcagtctgatctccaagtgccagtgacggaaccagacatc
aacaaccggctggagtctctgtgtttgagtatgacagagcatgccctgggagatggagtt
gaccgcacatccaccatctga
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