Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374953
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Entry
139374953 CDS
T10872
Name
(RefSeq) neurexin 3a
KO
K07377
neurexin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139374953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139374953
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
139374953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Protocadherin
Motif
Other DBs
NCBI-GeneID:
139374953
NCBI-ProteinID:
XP_070972328
LinkDB
All DBs
Position
19:24414339..24861766
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AA seq
1694 aa
AA seq
DB search
MDVLGLSARLQLLLSAFLGVCLSLEFTGAPGQWARYLRWDASTRSDLSFQFKTDVSTALL
LYFDDSGYCDFLQLMVVEGKLQLRFSIDCAETAVVSDKRVNDSSWHFATLSRYGLRTVLG
LDGQVKADEVRPTGGSRQHMKIVSDLFLGGVPLDIRTSALTLPTARDAPPFRGTISDLKY
GNTEPVLLSSLRVRLESEGRCTENPCENSGSCTVVDGEPMCDCSKTEYKGRFCNEEVNNN
IPGFSHMMMAEQAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNTWHDVKVTRNLRQVTISVDG
ILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELS
RLARIVDPKMKIQGDVVFKCENVATLDPISFETPEAYISLPKWNTKRMGSISFDFRTSEP
NGLILFTHGKPQERKEAQRSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQNKVND
GAWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPSDRANLILPTELW
TAMLNYGYVGCVRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKVAGKQCESYPCKNRGVCK
EGWNRFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPQVMHTEAEDVSLRFMSQRAY
GLLMATTSRDSADTLRLELDGGRVKLTVNLDCIRINCTSSKGPETLYAGQKLNDNEWHTV
RVVRRGKTYKLTVDDDVAEGQMAGDHTRLEFHNIETGIMTERRFVSAIPSSFIGHLQSLR
FNGMLYIDLCKNGDIDFCELNARFGMRSIIADPVTFKSKSSYLSLATLQAYTSMHLFFQF
KTTSPDGFIMFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRALHDNQWHNVVI
TRDNSNIHTLKVDAKATSQVVNGAKNLDLKGDLFIAGLGPGMYGSLPKLVASRDGFQGCL
ASVDLNGRLPDLLQDALFRSGQIERGCEVGFTKADLQGPSTTCQEDSCANMGVCIQQWEN
YTCDCSMTSYTGTQCNDPGMTYIFGKGGGLITFNWPANERPSTRTDRLTIGFSTSLKDGI
LVRIDSAPGLGDYLMLHIEQGKIGVTFNIGTMDISVRESSTPVNDGKYHVVRFTRNGGNA
TLQVDNWSINEHFPGATTDNERLEIATKKFPLKYARPVVDWLQEKGRQLTIFNTQATVTI
GGSDRSRPFQGQLSGLYYNGLKVLNMAAEGNPNIKINGSVRLVGDVPSVAGSARTTAQPP
EMSTTFIETTTTMSTTTTRKHRSSPTIQQTTDDIVSSAECSSDDEDLEECDSGHAGGELV
IPVLLEEPLVLPPVATRAPSIPLPPTLRPPLTIIETTKESLSTATEAGVPCLSDRGSDDC
DDDDDDGLVISGYGSGEAFNSNLPPTDDEDFYTTFSLVTDKTLSTSAFEGGYKVHAPKWE
TKDFSSNKPSSERGRTTTTAALPLAPDQSRYTSTATLHHTPPAKLPAGKMNNRELKPQPD
VVLLPLPTLPYEVDSTKQRAPVITSPMFRNVPTALPTQPGVNRVPGPPEVSRQSSSTTGM
VVGIVAAAALCILILLYAMYKYRNRDEGSYQVDESRNYITNSATQSNGAVMKDKQQSAKG
SKVKQKNKDKEYYV
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctgggcttgtctgcgaggctgcagctgctgctctcggccttcctgggtgtg
tgtctgagcctggagttcacaggggcccccggccagtgggcccgctacctccgctgggac
gccagcacgcgtagcgacctcagcttccagttcaagacagacgtgtccacggcactgctg
ctctacttcgacgacagtggctactgcgacttcctgcagctgatggtcgtggagggcaag
ttgcagctgcgcttcagcatcgactgcgccgagaccgccgtggtgtccgacaagcgggtc
aatgacagcagctggcactttgccacactgagccgctacggcctgcggacggtgctgggg
ctggacggccaggtcaaggcggacgaggtgcggcccaccggaggtagccgccagcacatg
aaaattgttagcgatctgttcctgggtggcgtgccgctggacatccgtacgtcagcgctc
acgctgcccacagcacgtgatgccccacccttcagaggaacaatctcagatctgaagtac
gggaacacggaaccagttctcctcagcagcttgagggttcgtctggagtcggagggccgc
tgtaccgagaacccgtgcgagaacagtgggagctgcaccgtggtggatggggaaccaatg
tgcgactgctccaaaacagaatacaagggccgcttctgcaatgaagaggtcaacaataat
attccaggattttcacatatgatgatggcggagcaagcacgggaggagaacgtggccacg
tttcgcggctccgagtacttctgctacgacctgtcccagaaccccatccagagcagcagc
gacgagatcacgctctccttcaagacgtggcagcgcaacggcctgatcctccacacgggg
aagtcggccgactacgtcaacctggccctgaaggacggggcggtgagcctggtcatcaac
ctggggtcaggggccttcgaggccatcgtggagcccgtcaacgggaagttcaacgacaac
acctggcacgacgtcaaggtcacgcgcaacctgagacaggtgacgatatcagttgacggt
atcctgacgaccacggggtatacccaggaggactacaccatgctgggctccgatgacttc
ttctacgtgggtggaagccccagcaccgccgacctgcctgggtctcctgtcagcaacaac
ttcatgggctgcctcaaagaggtggtctacaagaacaacgatatccgtctggagctctcc
cgtctggcccgcatcgtagaccctaagatgaagatccagggggacgtggtcttcaagtgt
gagaacgtggccaccctggaccctatctccttcgagacccccgaggcctacatcagcctg
cccaagtggaacaccaagagaatgggctccatctcctttgacttcaggacctcggaaccc
aacggactcatcctgttcacccacggcaagccccaggaacgcaaggaggcccaacgcagc
cagaagaacaccaaggtcgacttctttgcggtggagctcctggatggcagtctataccta
ctgttagacatgggctctggaaccatcaaggtcaaagccacccagaacaaggtcaacgac
ggggcctggtaccacgtggacatacagagggatgggcgttcaggcaccatctcagtcaac
agccggcgcaccccgttcacagccagcggtgagagtgagatccttgacctggaaggagac
atgtacctggggggtctaccctcggaccgtgccaacctcattctgcccaccgagctgtgg
accgccatgctcaactatggctacgtgggctgcgtgcgcgacctcttcatcgacgggcgc
agtaaggacatccgacagatcgctgaggctcagaacggcgccggcatcaagccgtcgtgc
aacaaggtggcggggaaacagtgcgagagctacccgtgtaagaacagaggcgtctgtaag
gagggatggaaccggtttatatgtgattgtaccggcacggggtactggtcacgcacctgc
gagagagaggcatccatcttgagttatgacggcagtatgtacatgaaggtggtgatgccc
caggtgatgcacacagaggctgaggacgtgtctctacgtttcatgtcccagcgggcctac
ggcctgctcatggccaccacctcacgggactcggccgacacgctgcgtctagagctggac
gggggccgggtcaagctcacggtcaacctagactgtatcaggataaactgtacttccagc
aagggacccgagaccctgtatgctgggcaaaaactcaatgataatgagtggcatacggtg
cgcgtggtccgccggggaaaaacctacaagctcacggtggacgatgacgtagcagaaggc
cagatggcgggtgaccacacccgtcttgagttccacaacatcgagacgggcatcatgacg
gagagacgcttcgtctcggccatcccctctagcttcatcggacacctgcagagcctcagg
ttcaacgggatgctgtacattgatctctgtaagaacggagacatcgacttctgcgagcta
aacgcccggtttggcatgcgctccatcatcgctgaccccgtgaccttcaagtccaagagc
agctacctgagcctggccaccctgcaggcctacacctctatgcacctgttcttccagttc
aaaaccacctccccggacggcttcataatgttcaacagtggagacggaaacgacttcatc
gctgtggagctagtcaaagggtacatccactacgtgtttgaccttggcaatgggcctaac
gtcatcaagggtaacagcgaccgggctctccatgacaaccagtggcacaacgtggtcatc
acccgtgacaacagcaacatccacacgctgaaggtggacgccaaggcaaccagccaggtg
gtcaatggagccaaaaacctcgacctgaaaggcgacctgtttattgctggactgggccct
ggtatgtacggtagcctgcccaagctggtggcgtcccgggatggcttccaaggctgcctg
gcctctgtggacctcaacggccgcctccctgacctcctccaggacgcgctgttccgcagc
gggcagatcgagcgaggatgcgaagttggtttcaccaaagctgacctacaaggtcctagc
accacctgccaagaggactcatgtgccaacatgggcgtctgtatccagcagtgggagaac
tacacctgcgactgctccatgacctcctacaccggcactcagtgcaatgatcctgggatg
acttatatctttgggaaaggaggaggcctcattacgttcaactggccagccaacgagagg
ccaagcacgcgcacagacagactgaccatagggttcagtacttccctaaaggatggcatc
ttggtccggatagacagtgctccgggtctgggagactatctcatgctccacatcgaacaa
gggaagatcggtgtgacgtttaacatcggcacaatggacatcagtgtgagagagagcagc
acccctgtgaatgacgggaagtaccatgtggtgcggttcaccaggaatgggggcaacgcc
accctccaggtggacaactggtccatcaacgaacacttcccaggagcgacaaccgataat
gaacgccttgaaattgccactaagaaattcccattgaaatacgcccggccagtagtggac
tggctacaagagaaaggtcggcagctaacgatattcaacacccaggccacagtcaccatc
ggtggcagcgaccgcagtcggcccttccagggtcagctgtctggcctctactacaacggc
ctcaaggtcctcaacatggctgccgagggcaaccccaacatcaagatcaacggcagtgtc
cgattggtaggcgacgtgccctctgtggccgggtcggctcgcaccaccgcccagcccccc
gagatgtccaccacctttattgagaccaccaccaccatgtccaccaccaccacccgcaag
caccgctcctctcccaccatacagcagacaacggatgacatcgtgtcgtcggcagagtgt
tcgagtgatgacgaggacctggaggagtgcgactctggccatgcaggaggtgaattagtg
atcccagtactcttagaggaaccgttagtgctgccccctgtagctactcgtgcaccctcc
atcccccttcccccaaccctccgcccacccctcaccattattgagaccaccaaagagtcc
ctgtccacggccactgaggcgggggtaccttgcttgtcggatcgaggcagcgatgattgt
gatgatgatgatgatgatggcttggtgatatcggggtatggctcaggggaagcgttcaac
tctaacctgccccctactgatgatgaagatttttacaccaccttctccttggtaacagat
aagaccttgtccacgtcggcctttgaaggtggctacaaagttcatgcgcccaagtgggaa
accaaggactttagctctaacaaaccgtcctcagaacgcggtaggactaccactaccgct
gcgctgccgctagcccccgaccagagccgctacacctccaccgcaaccctgcaccacacg
ccacccgccaagctgcctgccggcaaaatgaataaccgcgagctaaaaccccagcctgac
gtagtgttgctcccgttgcccacactaccctatgaggtagacagcaccaagcagagggct
cctgtaataacctcccccatgttccgtaatgtacccacagccctgcccacccagcccggc
gtcaaccgagtcccgggacccccggaagtgtcccgccagtctagcagcaccaccgggatg
gtcgtcgggatagtggcggccgccgccctgtgcatcctcatcctcctgtacgccatgtat
aagtacaggaacagggacgagggctcctaccaggtggatgagagcaggaattacatcacc
aactcggccacgcagagcaatggagccgtcatgaaggacaaacagcagagcgcaaaaggc
agcaaagtaaaacagaaaaacaaggacaaggagtattacgtgtga
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