Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139374980
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Entry
139374980 CDS
T10872
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139374980
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
139374980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139374980
NCBI-ProteinID:
XP_070972378
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Position
19:26249606..26290858
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AA seq
1188 aa
AA seq
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MKKFNIRKVLDGLAASSFSSASPQPGTSQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAVGTQSGAVRLFGRAGVECYCQHESGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYSYDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTIIITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFVVMSGGLSYDTGCRRACLTVMHGKSTALLEMNYPIVDFLTLCETPYPNDFQDPYA
VVVLLEKDLVVIDLRQIGYPIFENPYSLSIHKSPVTCVEYFADCPPELIPALYSVGSWQK
RPGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
ALKDGNEEKPSTEIVDEDPYAIQTLSWCPESRMLCVAGVSAHVIIYRFSKHEITTEVVQL
LEVRMQCELDDVDSPDTAGEHPLTPSTPVHSTCPTQEGEPPETQSSTTDDGPRDNVPCLK
VRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVNSSYGLVVFGNSNGLAVVDYLQKT
LVLNMGTSELYSPSDPYQRQPRSPRKKPQPSGALSDNNNGNNALEEKSNKSPTSVGSTSP
TNSDDEHKQERFIQKVKSKSRRFSKTVANDFAKMSRKICSPTEQKTDLEKRVRRQRSLPY
KKRFCCVKEGKEPRKSLSQQRTLSVPYLNAKDSLFSRSRSSSVTSIELESREAISSIHFS
ESFPRKTDGSGSPSLWVGTTQGTVLVLALSLPPTGDLRLQQPVRVSSCGTLVRLKGGILT
MAFLDSLGAVLPPSYEPWSEPNPPDEEEKEKARRRRLASPPPTQEGQDSQYAVVCSEKQA
KVVGLPSQSCFFKHNITESSFVLRADVVQMAAGLCLACFCANGHIMALSLPSLRPLLDVN
YLPLTDMRIARTFCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPIETPEAP
NRGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLAR
ARIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatattagaaaagtgctggacggcttggctgcttcttcattttcctct
gcatctccacaaccgggaactagtcaaaacgatgtgatccaagagacactacagtcggag
cattttcagctctgcaagactgtgcgccatggcttcccttaccaaccctcctccatggcc
tttgaccctgtgcagaagattctggctgtcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcaacatgagagtggtgcagctgtcattcagctc
cagttcctggtcaacgagggggcgctagtcagtgccttagctgatgacagcgttcatctg
tggaacctgaggcagaagcagccagctatcctgcacactctcaaattcaacagggagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacattggcacagagaaagga
aacatccacatcgtcaacgttgagtccttcacactctcaggctacgttatcatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cctatggacgagggaaagattttgattggatttgaatgtgggactgttgtgttgtgggac
ctgaaatgcaaaaaagctgactaccgctacagttatgatgaggctatccactcggtagcc
tggcaccacgagggcaaacagttcacctgcagccactcagatggaactctgactacatgg
aacgtacgcgtccctgccaagcctacaatcatcatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgtaaacctatccttaaagtggagtacaaaacgacaaga
gctggggacgcctttgtggtcatgtctggaggcctgtcctatgacacagggtgcaggaga
gcctgtctgacggtgatgcatgggaagagtactgccctcctggagatgaactatcccatc
gtagacttcctcacgctctgcgaaacaccatatccaaatgatttccaggatccttatgcc
gtagttgtccttttggaaaaggatttagttgtcatcgaccttagacaaataggataccca
atatttgagaacccgtactctttgtcgatccacaagtctccagtgacgtgcgtagaatat
tttgctgactgccctcctgaactcatacctgcactttactctgttggctcctggcaaaag
agaccgggttacagtaagaaggaatggcccataagtggtggtaactggggccaaggcaca
ctaagctaccctgagatcatcgtcactggacatgctgatggctcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctctaaaggatggtaatgaggagaagccgagcacggagatagtggatgaggatccctac
gccatccagaccttgtcgtggtgcccagagagcaggatgctgtgtgtggctggagtctct
gcccacgtcattatctataggttcagcaaacatgaaataaccactgaggtggtgcagctg
ttggaggtgcgtatgcagtgtgagctggatgatgtagattctccagacaccgcaggagag
catcctctcaccccatctaccccagtgcactccacctgcccaacccaggagggagaaccc
cctgagacccagtcctccacaactgatgacgggccccgggataatgtaccatgcctcaag
gtccggagctcccctctgaagcagtctcctggttaccaggtggagctggtaattcagctg
gtctgggttagtggggagccgcctcagcagatcaccagtctggctgtcaactcctcatac
ggacttgtggtgtttggcaacagcaatggtctggctgtagtggactaccttcagaagacc
ctcgtcctgaacatgggcacgtcagagctgtacagtccctcagacccctaccagagacag
cctcggtcgcctcgcaagaaaccacagccgtctggagctctcagtgataacaacaatgga
aacaacgctttagaagagaaaagcaacaaatcaccaacgtcagtaggctctacgtcaccc
accaattcagacgatgaacacaaacaggaaaggttcatacagaaggtgaagtccaaaagc
agacggttttccaagacggttgccaatgactttgccaagatgtcaaggaaaatttgctcg
cctacagagcaaaagacagacctggagaagagggtgcgacgccagcgctctctcccgtat
aagaagcgcttttgttgtgtgaaggagggcaaggagcccaggaagtctctctcccaacaa
aggactctctcagtcccttacctcaatgccaaggacagtttgttcagccgctcgaggagc
tccagtgtgaccagtatagagttggagtcccgcgaggccatctcctccatccacttcagt
gagagtttccccaggaagacagacggcagtggcagtcccagcctgtgggtgggcactacc
cagggcactgttctggttctggccctaagcctgccacccacaggggacctgaggcttcag
caacctgtcagagtatcatcttgtggtactctggtcagacttaaaggaggtatcctgacc
atggctttccttgactcccttggggcggtcctccccccttcctacgagccgtggtcggag
cccaaccctccggacgaggaggagaaggagaaggcaaggcggcgcaggctggcctctcca
ccccccacccaggagggtcaggacagccagtatgctgtggtgtgttcagagaaacaggcc
aaagtggtgggcctaccctcccagtcctgcttcttcaaacacaacatcacagagagctcc
tttgtgctgagagctgacgtggtgcagatggctgctggactctgcctcgcctgcttctgt
gctaatggacacatcatggctctgagtctacccagtctcagaccactcctggatgtgaac
taccttcccctgacagacatgaggatagcccggaccttctgcttctccaacctgggccag
gccatgtacctcacctcccccaccgagatacagagaatcacatacagccaggagacctgc
gacaatctacaggaaatgatgggagagttgtttacaccgatagagacaccggaggctcct
aacagaggtttcttcaagggcctgtttgggggaggggctcagtccctggatagagaagac
ctgtttggtgagacggcggcgggaaaggcgtctcgtagcctggcgcagcacattcctggg
ccccagggcatggagggcatgaagggggcagcctcgggagtggtgggggacctggcccgt
gcccggatagccctggacgagagggggcagaaactgggcgagctggaggacagaaccgca
gccatgatggccagcgctgactccttctctaaacacgctcatgatatgatgctgaagtac
aaagataagaagtggtatcagctttga
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