Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375036
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Entry
139375036 CDS
T10872
Name
(RefSeq) AT-rich interactive domain-containing protein 4A-like
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139375036
03036 Chromosome and associated proteins [BR:
ocla03036
]
139375036
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
ARID
139375036
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139375036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
139375036
NCBI-ProteinID:
XP_070972507
LinkDB
All DBs
Position
19:complement(31520242..31541272)
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AA seq
1372 aa
AA seq
DB search
MKAANEPAYLTVGTEVSAKYRGAFCEAKIKTVKRMVKVKVMVKGDTTSQVVQDDQVKGPL
RVGSTVEVKSAEGICSEATINKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKGNRGGRRSSQAHADDDKESSSSEDDNEDRRRLNDDLMGKVA
SVQTGTERTSWYLALVISPSCNDDLTVKKDQCLVRSFADSKFHTVARKEIHEVNMDSISK
AEFSPRKGLDGAVHFLKTKVVPDSWKMDMSEILESSSSDEEDTEGKESDDDDEEEEEEEK
EEEEEEEKEDANDEPEDEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFR
LVYHQGGCDKIESGSVWKQIYIDLGIPVLNSAASYNVKTAYRKYLYGFEEYCRSACIVFR
TIHHSEDPPASQSQTEEKAAQIPEVKECQGPTPSVKTESAAAMEDKPAQEEAAESGSESD
KDVSSPRGRRRCTVTPVKAEVKEPSKLEKIKEKEEQSGVGETSGEETGGPRDDSRSDGGD
TPGNRRSRRLEESDKESEDEEELEDEEDSERRVGERGEDEDSEDSVTGTKVKVKYGRGKT
QKIYEANIKKAENDDGGDVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKKKQKKKVKN
KEEGEKEDDKQGKLCGLKRGRPLLRTTSASANRSVSKTPSSEEGSSSKSKSDVSALPNGE
GNPRRRTRTTSGMYDSDRDSTSNEESGNSSEDSESEDSPEKKPAWAERTDPATARKQEEE
EDRRVERGRAEAAAAAAAQVAAQDQPPSSPQEKEQQEDTLPERREPEKAEEQPQVPPMTP
EPDRTKEEDPPTPKSPRSKAARRSNVREPERNPNNDTGSETPTKTTITTPNNTETESSPC
PRTLNRQDEPMVVLHCLPAEHIPSIPDLPTMDSDTDSATEEEICREERGVAKRKATEQRT
PDKKVRLDRREETTKMASPVRRPADSPARRPADSPEWRLEVGGQRGEERLTPAKGKTEMP
AFTPEVQCQSLGEGGVAGGRPRSEQLASGVEEEVMPQIGPEALVCHEVDLDDLDEKDKTL
AEDLLMMMSQGKVHAPPPSNASSHQTHNNPPLSSGGAAPPRVFSHTSAPSPDESHSTKSE
SDVPIEVDSVAGESQEGLGDNESANSNCFEASTSSSNSSMSLQERDTKDRGQKRLMDCHL
SSSAKKQKRNQKRPSTTSKIDKNGAGHSSDSEDLAVMDTSSKLTPVKHSMSKGTQKLVSP
NSKELEKYKHKDKQSSFPSPRTYKWTFQLNELDSMTSAERISFLQDKLQDIRKYYMSLKS
EVASIDRRRKRLKKKEREVSHTTASTSSGSSDTGMSPSSASPTQNTVAVECR
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcaaacgagcctgcctatctgaccgttgggacggaggtcagtgccaaatac
agaggtgccttctgtgaggcaaaaatcaagactgttaaacggatggtgaaggttaaggtg
atggtcaaaggagacaccacctcgcaagttgttcaagatgatcaagtgaaaggaccgtta
agggtgggctccacagtggaggtgaagagtgcagaggggatctgcagtgaggcaaccatc
aacaaactcacagacgccagttggtacacagtggtgtttgacgatggggatgagaagaca
ctccgcaggacgtcactgtgtctgaagggagaaagacattttgctgagagcgagacattg
gaccaactgcccctaaccaacccagagcactttggcacccccgtcatcgggaagaaggga
aaccgcggagggaggaggtcatctcaggctcatgcggacgatgataaggagtcgtcttcc
agtgaagatgacaatgaggacaggaggaggctaaacgatgacctgatgggtaaagtggcc
agtgttcagactgggacagagcggacatcctggtacctggccctggtgatatcacccagc
tgcaatgatgacttgacagtcaagaaggaccaatgtttagtcagatcatttgcagactcc
aaatttcacactgtggcaagaaaggagatccatgaagtgaacatggacagcatctctaaa
gctgagttctcaccgaggaaagggttggatggggcagtgcatttcctcaagaccaaggta
gttcctgacagttggaagatggacatgagtgagattttagaatcctccagcagtgacgag
gaggacacagaaggaaaggagagtgacgacgacgatgaggaggaggaggaggaggagaag
gaggaggaggaggaggaggagaaggaagatgccaatgatgagcctgaggatgaggcggac
ccagaggagagggatcacttcctgcagcagctgtataagttcatggaggatcgagggacg
ccaattaacaagcctcctgtgctcggctacaaggatctgaacctcttcaagctcttcagg
ctagtctaccaccaggggggctgtgacaaaattgaaagtggatctgtgtggaaacaaatc
tacatagaccttggcattcccgtcctaaactctgctgcctcctacaatgtgaagactgcc
tatagaaagtacctgtatggcttcgaggagtactgtcgctcagcctgcatcgtcttcagg
accatccaccacagcgaggatccgccagcttcccagtcccagacagaagagaaggccgcc
caaatccctgaggtgaaggagtgccagggcccaacaccatccgtcaaaactgagtctgct
gcggccatggaggacaagcctgcccaggaggaggcggcagagtcggggagcgagagcgac
aaagatgtctcttctcccagggggaggagacggtgcactgtgaccccggtcaaagctgag
gtgaaggagccctcaaagctggagaagatcaaagagaaggaggagcagagtggtgtgggg
gagaccagcggagaggagactggaggtccgagagacgacagcaggtcagatggaggggac
accccggggaacagacgcagccgacgcctggaggagtccgataaagagtctgaggacgag
gaggagttggaggatgaggaagacagcgagaggagagtcggagaaagaggtgaggacgaa
gactctgaagactccgtaacagggactaaggtgaaggtaaaatacggtcgagggaagacc
caaaagatctacgaggccaacatcaagaaggcagagaacgatgatggaggagatgtcctc
tacctagttcactactacggctggaacgtcaggtatgatgagtgggtcaaagcagaccgg
ataatctggcctgtcgacaagggcggaacaaaaaagaaacagaaaaagaaagtgaagaat
aaagaggaaggcgagaaggaggatgacaagcaggggaagctgtgtggcttgaagcgaggt
cgccctcttcttagaaccacctccgccagcgccaaccgcagcgtctccaagacccccagc
agtgaggagggctccagcagcaagagcaaatctgatgtatcagccctgcccaacggagag
ggtaaccctcgccgacgcaccagaacaacctctgggatgtatgactcggacagggattct
acctccaatgaagaatcggggaactcgtcagaggacagtgagtcagaggattctcctgag
aagaagcctgcgtgggcggagaggacggaccccgccacagcccgtaagcaggaggaggag
gaggaccggagggtggagagaggaagagcagaggcagcagccgccgctgcagcccaggtc
gcagcccaggatcagccccccagcagccctcaggagaaggagcagcaggaggacacgctc
cctgagaggagggagccggagaaggctgaggagcagccccaggtgccccccatgacccct
gaacccgacagaactaaggaggaggacccccccaccccgaaatcccccaggtctaaagca
gcacgtagaagtaacgttcgcgagccagagaggaaccccaacaatgacactggctctgaa
acgcccaccaaaaccaccatcaccactcccaacaacactgagaccgagtcgtctccctgc
ccgcgcaccctgaacaggcaggatgagcccatggtggtccttcattgtctcccagctgag
cacattcccagcatccctgaccttcccaccatggactctgacacagactcagctacggag
gaggagatctgcagggaggagcgaggtgtggccaagcgtaaagccactgagcagaggacg
ccggacaagaaggtgcgtctggacaggagggaagagacgaccaagatggcgtcgccagtc
aggcggcccgctgactcgccagccaggcggcccgctgactcgccagagtggaggctggag
gtggggggacagagaggcgaggagcgcctgacgccagcaaagggtaaaacagagatgcct
gccttcactccggaggtgcagtgtcaaagtctaggagagggaggtgtagcaggaggtcga
cccaggtcggagcagctagcctcgggggtcgaggaggaggtgatgccccagatcggccct
gaggcgctggtctgtcacgaagtggatctggacgacctggatgagaaggacaagacctta
gcagaagacctcctaatgatgatgagtcaagggaaggtccatgctccgcctccgtccaat
gcctcctcccaccagacccacaacaaccctcctctgtcctcggggggcgctgctcctcca
cgggtcttctcccacacctctgcccccagccctgatgagtctcacagcaccaagagtgag
agcgacgtccccatcgaggtggacagtgtagccggggagtctcaggaggggcttggtgat
aacgagtcggccaactcaaactgttttgaagctagcaccagctccagcaactccagcatg
tcactacaggagagggacaccaaggacagaggtcagaaaaggttgatggactgccatttg
agttcttctgcaaagaagcagaagcgaaaccagaagcggccaagcacaacatccaaaatt
gataagaacggagcagggcacagcagtgacagtgaggacctggctgtcatggacacctct
agtaagctgactccagtgaaacactccatgtctaaaggaacccagaagctggtctctccc
aacagtaaggagctagagaaatataagcacaaagacaagcagtcctccttcccctcccct
cgcacgtacaagtggaccttccagctcaatgaactggacagcatgacaagtgctgagagg
atatccttcttacaagacaaactacaggatataaggaagtattacatgtcactcaagtct
gaagtggcctccatagacaggaggcggaagaggttaaagaagaaggaaagagaagtgtcc
cacaccacagcgtcaacatcgtccggctcgtcagacactgggatgagcccctcctctgcc
tctcccactcagaacactgtggctgtcgagtgtaggtga
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