KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375045
Entry
139375045         CDS       T10872                                 
Name
(RefSeq) signal recognition particle subunit SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03060  Protein export
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    139375045
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocla02044]
    139375045
Enzymes [BR:ocla01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     139375045
Secretion system [BR:ocla02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   139375045
  Eukaryotic Sec-SRP protein
   139375045
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 CbiA NPHP3_N AAA_17 DUF2209 ResIII AAA_33 MeaB AAA_22 SRPRB nSTAND_NTPase5 AAA MobB AAA_19 AAA_30 APS_kinase ATP_bind_1 nSTAND_NTPase7 Thymidylate_kin Zeta_toxin AAA_16 Torsin ArsA_ATPase
Other DBs
NCBI-GeneID: 139375045
NCBI-ProteinID: XP_070972520
LinkDB
Position
19:complement(31781646..31793254)
AA seq 504 aa
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRRMIQHSVFKELVKLVDPGVKAWTPTKGKNNVLMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK
NESFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
EVSSVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDLEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFTKQPNRIARVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggtgttagccgacttgggaagaaaaataacctcagcgttgcgatcactgagcaatgcc
accatcatcaatgaggaggtattaaatgcaatgctgaaagaagtatgtgctgccctccta
gaagctgatgtcaacatcaaattggtgaagcagctcagagaaaatgtcaagtcagccatt
gacctggaggagatggcctctgggctgaacaagaggcgaatgattcagcattctgtgttc
aaggagctggtcaagctggtggatccaggtgtcaaggcttggacacccacaaagggaaag
aacaatgtcctcatgtttgtgggtcttcagggcagtgggaaaaccacaacatgttccaag
ctggcgtactactaccaaagaaaagggtggaaaacctgtttgatatgcgctgacactttt
agagctggtgcttttgatcagttgaagcaaaatgcaacaaaagccagaattccattctat
ggaagttacacagagatggaccctgtcatcatagctgcggaaggtgtggaaaagtttaag
aatgagagctttgaaataattattgttgataccagtggtcgacacaagcaagaagattcc
ctttttgaggagatgttacaggtttccaatgcagtgcaacccgacaacattgtgtacgtg
atggatgcctccattggtcaagcttgtgaagcacaggctaaagccttcaaagacaaagta
gaagtttcctcagttatagtgacaaagctagatggccacgccaaaggtggtggtgctctc
agtgcagtggctgctactaagagtcccatcattttcattggtactggtgaacacattgat
gacttggagccatttaagacccaacccttcatcagcaagctactgggcatgggagacatt
gaaggtttgatcgacaaagtcaacgaactcaagctggatgacaacgaggagttgattgac
aagttgaaacatggtcagttcactcttagagacatgtacgagcagtttcagaacatcatg
aagatgggaccatttggccagatcatgggtatgatcccaggtttcggaacggacttcatg
agcaaaggtaacgagcaggaatccatggccaggttgaagaaactcatgacaattatggac
agcatgaatgaccaagaacttgacaacaaagacggtgcaaagcttttcaccaagcagccg
aaccgaattgcccgagttgcgcggggttctggggttgccaccagggacgtccaggagctg
ctcacccagtacacaaagttcgcacagatggtgaagaagatgggtggcatcaagggcttg
ttcaaaggtggtgacatgtccaagaatgtcaacccctctcagatggctaagttaaaccaa
cagatggcaaagatgatggacccaagggttctccaccatatgggtgggatggctggtctc
cagtccatgatgagacagttccaacagggtgcagctggcaacatgaaagggatgatggga
ttcaacaacatgtga

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