Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375050
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Entry
139375050 CDS
T10872
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139375050
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Other DBs
NCBI-GeneID:
139375050
NCBI-ProteinID:
XP_070972531
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Position
19:complement(31953226..32319511)
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AA seq
996 aa
AA seq
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MAPTKPSIQQDPTRREREIKTLHPFCMEGSEEEAIVDAQFMSKFPHDPYWERPANASSCS
ASRPKTLHLGGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPGAITSQ
LDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGVQRRRTPSAVASEIFE
PHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMA
EQLGMKLPPGRGLLSQGTATEDGASSASSSSHAETPEPVESTSPSLLSPDNTLERSFFIR
MKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPIQIMGMVVVAHALPPPTINEV
RIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYQFIHAEDVEGIRHSHLDLI
NKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDTPMDIA
QLPNLPEKASESSETSDSESESKENSEDNENSKSDGKGNQTENSEDPETDSKKQQQGQSS
SEQEMRRQEEGDSSSNPESQESEDDLEPSDCELETKERRLGRLGGLHIKVEHYGDRDGRV
ELHNSPSSSEEEEDDDDDEEDDDDDDSVKDCDRATEMLAVPAASKQQKRKKRRKKQKWDG
SRSRRLRLSSATTSPGTMNHPTLGGDAPLLLPPSPASASVLKIKTEMSEPINFDNDSSIW
NYPPNREISRNESPYSMTKHVPTHDTFPSPQPGSLQVSIPDSVLTPPGTEGGGGGGGTRK
GVPPSFNGNSSAPSSASSVASLAPPSSSGSSSDPLSPPLSASPRDKQQGQGTPTTSNSSS
SLLYTSDLEALQRLQAGNVVLPLVHRVTGTLATTSTAASRVYTTGTIRYAPADVTLAMQA
GANLLPNNVAHAMNFVDVNGSPGFGIDPKTPMEMLYHHVHRLNMAGPFGGAVSGASLTQM
PAANVFTTAEGLFSTLPFPIYSNGIHTTQTLERKED
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaaacctagcattcagcaagaccctacaagaagagaacgggaaattaaa
accctacaccctttctgcatggagggatcagaggaggaggccatagttgatgcccaattc
atgtccaaattcccccacgacccttactgggagaggcctgctaatgccagctcctgttct
gcatctaggcccaagacactccaccttggaggagggcaacaacatacctcatcgccatgg
ttgcaggctctgaggaaggagaagtcccgggatgcggctcgctcgcggcgagggaaggag
aactttgagttctatgagctggccaagatgctgcccctgcccggcgccatcaccagccag
ctggacaaggcttccatcatccgcctcaccatcagctacctgaagatgagggacttcgcc
aaccagggggacccgccatggaacctgcgcatagaaggcccaccacccaacacctccgtc
aaagctataggagtacagcgaaggaggactcccagtgcagtagcctcagagatcttcgag
ccacacctcgggagccacatattgcagtccctggatggatttgtatttgcactaaacaag
gaggggaggtttttgtacatctctgagacggtgtccatatacctgggactttcacaggtg
gagctgacaggcagcagtgtgtttgactacgtccaccctggcgaccacgttgagatggca
gagcagctgggcatgaagctgcctccaggccgaggcctcctctctcagggcactgccaca
gaggacggcgccagctctgcctcctcctcctcacacgcagagacccccgagccagttgag
tccaccagccccagcctgctttccccagacaacactctagagcgctccttcttcatccgt
atgaagtccacactgaccaagagaggtgtccacatcaagtcttcaggctacaaggtgatc
catgttacaggcaggctgagaatccggatggcattgacccacagtcggtctgtacccatt
cagatcatgggcatggtggtggtagcccacgccctcccccctcccaccatcaacgaggtg
cgcatagactgccaaatgtttgtcacccgggtcaacatggacctcaacattgtctactgc
gagaatagaattagcgactacatggacctgacgccagtggacatcgtagggaagaggtgc
taccagttcattcatgcggaggatgtggagggtatccggcacagccatttagacttgata
aacaagggacagtgtgtgaccaagtactaccgctggatccagaagaacggtgggtacatc
tggatccagtccagtgccaccatcgccatcaatgccaagaacgccaatgaaaagaacata
atctgggtcaactacgtactcagtaatccagagtacaaggacacgcccatggacatcgcc
cagctgcccaaccttccagagaaagcctctgagtcttcagagacttccgactctgagtcc
gagtccaaggagaactctgaagacaacgagaactcgaagtcggacgggaaggggaaccag
actgagaacagcgaggacccggagacagacagtaaaaagcagcagcagggccagtcgtcc
tcagagcaggagatgaggcgtcaggaggaaggagacagctcctccaacccagagagccag
gagagcgaggatgacctggagcccagcgactgcgagctggagaccaaggagaggagacta
ggtcgactggggggcctgcacatcaaggtggagcactacggagatagagatggaagagtg
gagcttcacaactcgccgtcctcctctgaagaagaggaagatgatgacgatgatgaggag
gatgatgatgacgacgacagcgttaaagactgtgacagggccactgagatgctcgccgtc
cccgccgccagcaagcagcagaagcgtaagaagaggaggaaaaagcagaagtgggacggt
agtcgttctagacgcctgcgcctctcctctgccaccaccagccctggcaccatgaaccac
cccaccctggggggggatgcccccctcctgctgcccccctcccctgccagtgcatccgtg
ctcaagatcaaaacagaaatgtccgagcccatcaacttcgacaacgacagcagcatctgg
aactaccctcccaacagggagatctccaggaatgagtccccctacagcatgacgaagcac
gtcccaacccacgacacctttccctccccacagcctggcagtctgcaggtctccatccca
gactcagtgctcactccaccaggaacagagggaggcggcgggggtggaggaaccaggaag
ggcgtacccccctccttcaacggtaacagcagcgccccctcctcagcctccagcgtggcc
agcctggcccctccctccagctctggctcctcctccgaccccctgtccccacccctctca
gcctcgccgcgcgacaagcagcagggtcagggcacccccaccacctccaactcctcctcc
tccctgctgtacaccagcgacctggaggccctgcagaggttgcaggctgggaacgtggtg
cttcctctggtccaccgggtcaccggcaccctcgccacgaccagcactgccgcctcccgg
gtgtacaccactggcaccatccgctatgcccccgccgacgtcaccttggccatgcaggca
ggcgccaacctgttgcccaacaacgttgcccacgctatgaactttgtggatgtcaacggt
agccccggcttcggcatcgaccccaagacgcccatggagatgctgtatcatcacgtccac
cggctcaacatggctggcccctttggcggtgccgtgtccggcgccagcctcacccagatg
ccagcagccaatgtattcaccacggcagagggactgttctctactcttccattccctatc
tacagtaacgggatacacaccacacaaactctggagcgcaaagaagattag
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