Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375051
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Entry
139375051 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein 5-like
KO
K13709
Rho GTPase-activating protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139375051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139375051
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139375051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
FF
GTP_EFTU
NOG1
Roc
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
139375051
NCBI-ProteinID:
XP_070972533
LinkDB
All DBs
Position
19:complement(32514010..32550887)
Genome browser
AA seq
1502 aa
AA seq
DB search
MAKNKEARPLTYAVSVVGLSGTEKEKGNCGVGKSCLCNRYVRSNADSYYTEHTSVLSTID
FGGRVVNNDHFLYWGEVPHRSDDGLECKIQIIEQTEFIDDQTFLPHRSTNLQPYTKRAAA
SKIQSAEKLMYICTDQLGLEQDFDQKQMADGKLNVDGYILCIDVSKGCNRKFEDQMKFVN
SLYSQMVKSKKPIVIAATKCDECVEQYLRDLQAFAASKKNLLVVETSARSSINVDLCFNA
LTQQMDKTRGKPKTIPYLEAYKVQRQLVATVSDKFEKRIVQTVRDYHTSWKMVSNTLKNH
PDYEEYINLEGTRKARNTLNKHIEQLKQEHIRKRREEYFLSLPKILNNLLNNLEELENLS
WSEAQSILKSRAEFQFWFVVLEHTPWDETDQIDKVNDRRVPFDLLKTSEGEKIYQNHVQH
LFSEKRRLEMKDRFKKTLDRVHFISPGQPWEEVMCFVMEDEAYKYISESDRRDVYSQHQQ
EIVERAKEEFQEMLFEHAELFYDLDLNATPSCDKMSEIHTVLNEEPRYRALQKLAPDRES
LLLKHIGFVYHPTKETCLSGQSCVDMNVEQVLANRLVQLDHSRSNLYYNSANIEKVNLCL
LGREGLAQELANEIRAQSTDDEYTLDGKIYELELLPVDVNSTLLFSHTWASTFKPHGIFC
VFSSIESLNCIGDCIGRIRAEIAQNRRERYAQPLPFILILANQRDSVCKNMPILRHQGQQ
LANKLQCTFVDIPSDTFPRKFNELQIKQALRGVLEGLKHNFDVTSPLPSIKDMSETDLRI
VMCAVCGDPFSVDLILSPFLDSHSCSAGQPGQSNTLILNKIIGDSRRRIQVTVLSYHSSI
GIRKDELVHGYILVYSAKRKSSMAMLRAFLAEVQDVIPVQMVAITDSQADFFENDEIKEL
MTEGEHIATEITAKFTALYSLSQYHRQTEVFTPFFNEVLEKKSSIESAFMYDSSRDCMGA
SEDVFPQSPHSHSPAYNYYPDSEDDTEAPPPYSPIGDDVQLLPTPSERAKYRIDLEGNEY
PVHSTPLSDHERNHRVPPPVRPKPILPKSNVKKLDPNLLKTIEAGMRSNRRQRGPMAHGE
DVETSDNYADPIDTLLKSKGFSDDIYAVPEDTQSRIVKMRNSFGGLHVLHGDEENGFDRK
TQASRRPSKYKHRSKILFSKTKMYHRRVHSDVSDDESGPAMQKKKKGRAHRGSEEDPLLS
PADPWKGGIDNPAITSDPEQDDMKKKKKKTPKTKEPKKPKSKPPKPLYPPTRRNWDSNYF
GVPLQNLVTPDRPIPLFIEKCVDYIERTGLNTEGLYRVSGNKTDQDNIQKQFDQDHSVDL
IVMDVAVNAVAGALKAFFADLPDPLIPYILHPELVEAAKIVDHIERLQVLKEIVRKFPAV
NYEVFKYVITHLNRVSQQSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQSVIES
FIQQSHYFFYGGDIQESSSTESTPPPHHCHSMVEALLPLQLPPPLQPQQIQHSMSLQPDP
LI
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaacaaggaggcacgccccctaacatatgctgtcagtgttgttggcctctca
gggacagagaaggagaagggcaactgtggcgtgggcaagtcctgcctatgcaacagatat
gtgcgctccaacgcggacagctactacactgagcacacttctgtgttgagcacaattgac
tttggaggtcgcgtagtgaacaatgatcacttcctctactggggtgaagtgccacaccga
agtgatgacgggcttgagtgtaaaattcaaatcattgaacaaacagagttcattgatgat
cagactttcttgccccatcgcagcacaaacctgcagccctatactaaaagggctgcagcc
tccaagatacagtctgctgaaaagctgatgtacatttgcaccgaccagcttggcttggag
caggattttgatcagaagcagatggccgatgggaaactgaatgttgacggttatatattg
tgtatagacgtgagcaaaggctgcaataggaaatttgaggatcagatgaaatttgtcaac
agcctttattctcaaatggtcaaatcgaaaaagcctatcgtcattgctgcaacaaaatgt
gacgagtgcgtggagcagtatctaagggaccttcaggcattcgctgcaagcaaaaagaac
ctcctggtggtagaaacgtcggctcgatctagcatcaatgtagacctgtgttttaatgcg
ttaacgcagcagatggacaaaacacgaggcaaacccaaaaccattccttatttggaggcc
tacaaagttcagagacagttagtagccacagtgtccgacaagtttgaaaagcggattgta
caaaccgtcagagattatcacacaagttggaaaatggtgagtaacacgttgaaaaaccac
cctgactatgaggaatacatcaacctggaaggcacccgaaaagctagaaacaccctcaac
aagcacatagaacagctgaagcaggaacatatcaggaaaaggagggaagaatacttcttg
agcctgccaaaaattctcaataacttgctcaacaacttggaagaacttgagaaccttagc
tggtcagaggctcaaagcatcttgaagagcagggccgagtttcaattctggtttgtggtg
ctggagcacaccccgtgggatgagacggaccaaattgacaaagtcaatgacagaagagtg
ccctttgatctcctcaaaacgtcggaaggggaaaagatttatcagaaccatgtccaacat
ctgttctcagagaaaagacggttagaaatgaaggatagattcaagaagacgttggataga
gtccatttcatcagccctggacaaccctgggaagaggtcatgtgttttgtcatggaagac
gaggcctacaagtatatcagtgaatctgatcgcagggatgtttacagccagcatcagcag
gaaatagttgaaagggccaaagaggaatttcaggaaatgctttttgaacacgccgagctg
ttttatgaccttgatttaaacgccaccccaagctgtgacaaaatgagcgagatccacact
gtgctcaacgaggagcccagatacagagccctgcagaaactggccccggacagggagtcg
cttctcctcaagcacatcgggttcgtttaccaccccacaaaggagacgtgtctgagcgga
cagagctgcgttgacatgaatgtcgagcaggtactggctaacaggctagttcaactggac
cacagtcgctctaatctctactataacagtgccaacattgaaaaagtcaatctgtgtctc
ttgggaagagagggtctcgcacaagaactcgcaaatgaaatccgagcccagtccacagat
gacgagtacaccctggatgggaaaatctatgaactggagcttctgcctgttgatgtcaat
tcaacgttgctctttagccatacatgggcgtcgaccttcaaacctcacggaatcttctgt
gtcttcagctccatagagtcgctcaattgtattggcgactgcatagggcgaatcagggca
gagattgcacagaacaggagggagagatacgctcagccattgccattcattctaatccta
gcaaaccagagagacagtgtttgcaaaaatatgcctatcttgaggcatcagggccaacag
cttgcaaataagctacagtgcacctttgtagacataccctctgatacttttccgcggaag
tttaatgagttacaaattaaacaggctctcagaggagtattagaaggactaaagcacaac
tttgatgtgacgagccctctgccttccatcaaagacatgtcagagaccgacttgaggatc
gttatgtgtgccgtgtgtggggatccattcagtgtggaccttatcctttcaccattcctg
gattcacattcctgcagcgcagggcaacctggccaaagtaacactctgatcctcaacaaa
atcatcggcgacagtcgcagaagaatacaggtcacagtcctctcctaccactcctccatc
ggaatcaggaaagacgagcttgtccacggatacatcctggtctactcggcaaaacgcaag
tcctccatggcgatgctcagagctttcctggcggaggtccaagacgtcatccctgttcaa
atggtggccatcacagacagtcaagccgacttctttgagaacgacgaaatcaaagagctc
atgactgaaggggagcacatcgctacggagataaccgccaaattcacagctctatactct
ctgtctcagtaccatcggcagacggaagtcttcacaccgttcttcaacgaggtgctagag
aagaagagcagtatcgagagcgccttcatgtacgatagctctcgagactgcatgggtgcg
agtgaagatgtcttcccccagtctccccacagtcattcccctgcttacaattactaccct
gactcagaggatgacaccgaggctcctccaccttacagccccatcggggatgacgtgcag
cttcttccaacgcctagcgaacgtgctaagtacaggatcgatctggagggaaacgagtac
cctgtccatagcacacctctcagtgaccacgagcgcaaccacagagtgcctcccccggtt
aggcccaagcctatactacccaagtccaacgtcaagaagctggaccccaatctcctgaag
accatcgaggctgggatgaggagcaacagacgacaacgcggccccatggcccacggtgaa
gacgttgagacgtccgacaattacgcagaccccatagacactctcctgaaatcaaaaggc
ttcagcgacgacatctacgctgtcccggaggacacccagagcaggattgtcaaaatgcgc
aattcgtttggggggcttcacgtcttgcacggggatgaggagaacggctttgaccgcaag
acacaagccagcaggaggccctccaagtataagcaccgctcaaaaatactcttcagcaaa
accaagatgtaccacagacgtgtccactccgacgtcagcgacgatgagtctgggccggcc
atgcagaagaagaaaaagggcagggcccatcggggcagtgaggaggaccccctgctctcc
cctgctgacccctggaagggagggatagacaaccctgccatcacctccgatccagagcag
gatgacatgaagaagaaaaagaagaaaacgccaaagacaaaggaacccaaaaagccaaaa
tccaagcccccaaagcctttgtacccacccacacggaggaactgggacagcaactacttt
ggtgttcccctgcagaacctggtcaccccggaccggccaatccccttgttcattgagaag
tgtgtggactacattgaacgcactggacttaatacagagggcctgtatcgtgtgagtgga
aacaagaccgatcaagacaatattcagaagcagtttgatcaagaccacagtgtggacctg
atagtgatggacgtggctgtgaatgctgtggcgggggctctgaaggccttcttcgctgac
cttcctgatcctctcatcccctacatcctgcacccggagctggtggaggcagccaaaatt
gtggaccacatagaaagacttcaagtgctgaaagaaatagtgaggaagttccctgccgtg
aactacgaggtgtttaaatacgtcatcactcatctgaacagggtgagccagcagagtaag
actaccctgatgacggccgacaatctatccatctgcttctggcccacattgatgcgtccc
gactttgagaacaaggacacactctcaaccaccaagctcaaccagtcggtcatcgagtcc
ttcatccagcagagccactactttttctacggtggagacatccaggagagctccagcacc
gagagcaccccaccaccccatcactgtcacagcatggtggaggccctgctgcccctgcag
ctgccccctcctctccagccccaacagatccagcacagtatgtccttgcagcctgaccca
ctcatatag
DBGET
integrated database retrieval system
