Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375110
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Entry
139375110 CDS
T10872
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139375110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139375110
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
139375110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
AAA_16
AAA_2
AAA_5
RuvB_N
PRS7_OB
nSTAND3
DUF815
AAA_14
AAA_7
Prot_ATP_ID_OB_N
AAA_33
TIP49
AAA_11
RNA_helicase
Csa3_N
bpMoxR
AAA_3
AAA_18
Mg_chelatase
NPHP3_N
AAA_lid_PRS2_C
AAA_24
AAA_28
DUF5906
TsaE
AAA_25
NACHT
ATPase
DUF3829_2nd
GAS
AAA_17
Parvo_NS1
IstB_IS21
COG4_N
Motif
Other DBs
NCBI-GeneID:
139375110
NCBI-ProteinID:
XP_070972684
LinkDB
All DBs
Position
19:37267433..37277244
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AA seq
389 aa
AA seq
DB search
MADPRDRGLQDYRKKLLEHKEIDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKAMLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARMDILKIHSGPITKHGEMDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHE
YVTQEDFMKAVRKVADSKKLESKLDYKPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcccagagacaggggacttcaagattacagaaagaaattgctcgagcacaaa
gaaattgatggacgcttgaaagaattgcgtgaacaactgagagaacagacaaaacagtat
gaaaaatccgaaaatgatctgaaagctctacaaagtgttggacagattgttggtgaggtc
ctgaagcagcttacagaggaaaaattcattgtcaaagcaaccaatggcccacgatatgtg
gttggatgcagacggcaactggacaaggctatgctcaaacctggtactagagttgcattg
gatatgaccacactgactatcatgaggtaccttcccagagaggtggacccccttgtgtac
aatatgtctcatgaagaccctggcagcgtctcctactctgagatcggaggcttggctgag
cagatcagagagctcagagaggtgattgagctgcctctgaccaaccctgagctcttcctg
agggtgggcatcatcccccctaaaggctgcctgctctacggacccccaggaactggaaaa
acacttttggccagagcagttgctagccagcttgactgcaattttctaaaggtggtgtcc
agctccatagtggacaagtacattggtgagagcgctaggctgatccgagagatgttcaac
tacgccagagaccaccagccctgcatcatcttcatggatgagatcgatgccataggtggt
cgtcgtttctctgaggggacgtctgcagacagagaaatccagaggacactgatggagctg
ctgaaccaaatggatggctttgacaccctgcacagagtgaagatgatcatggccaccaac
cgtccggacacgctggaccctgcccttctaaggccagggagactggaccgcaagatccac
atcgaactgcccaatgagcaggctcggatggacattctgaagatacactctggaccaatc
actaagcatggagagatggattacgaggccattgtgaagttgtctgatggatttaatgga
gctgatttaaggaacgtgtgcactgaagcaggtatgtttgcaatccgtgctgaccatgag
tatgtgacccaggaagatttcatgaaggccgttcgcaaggttgcagattctaagaaactg
gaatccaagctggactacaagcctttatga
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