Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375113
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Entry
139375113 CDS
T10872
Name
(RefSeq) growth/differentiation factor 6-A-like
KO
K20013
growth differentiation factor 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139375113
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139375113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139375113
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Transforming growth factors (RSTK binding)
139375113
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Vir1p
Motif
Other DBs
NCBI-GeneID:
139375113
NCBI-ProteinID:
XP_070972689
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Position
19:complement(37470269..37474502)
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AA seq
472 aa
AA seq
DB search
MILTQSKEQGEFPKSSNPSNFLIYSYRPLKMDPIRAAVPLLWLSLCFGNILEAAVLGSLQ
YPSGADDNGLVSHLDERSRREPTAVSRKDPPINDTIVPHEYMVSLYRTLSEIESRGLNSS
APRTARLANTVTSFVDQGKDHSSWGSGQRYLFDLSSLSRTDELVEAELRILRKPPLDLLP
VLTWGRNLYRLLLYTCPSEGNSGRRLLDSRTVDVLDGEAPKWDVFDVWASVKARRRSHRT
AAGNDLLVACFDLLVVSELTKEAANPLTVGLQRQSRQPQERALLVAFSRTRRKENLFKEI
REQIKAVRGHMGFLDPLNLSGDVVGHLSRRRRRRTALTSRSIGGAGGGGGGVGVGGGGRS
GGGSGRRKTRCSRRQLHVNFKELGWDDWIIAPLDYEAHHCEGVCDFPLRSHLEPTNHAII
QTLMNSMDPDSSPPSCCVPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgatattaacacaatctaaagagcaaggggagtttccaaagtcatcaaacccgtccaac
tttctcatttacagctatagaccactgaaaatggatcctattagggctgctgttcctttg
ctatggctttccctgtgctttgggaatattctggaggcagcggtacttggatcattgcag
tacccctccggtgcggatgataacgggcttgtatcacatctggatgagcggagtcgcaga
gagccgacagcggtgtccaggaaagaccctccgataaatgatactatcgtcccccatgag
tatatggtatctctatacaggacactatctgagatagagagcagagggcttaacagcagt
gctcctcgcaccgcaagactcgccaacaccgtgaccagtttcgtggatcaaggaaaagat
cactcctcctggggaagtggccagcgctatctcttcgatctctccagtctgtccaggact
gatgagcttgtggaggcagaactgaggatcctgagaaagccaccgctggatctccttcct
gtgctgacatggggcaggaatctttatcgcctcctcctctacacttgtccgtctgagggg
aactctggaagacggctgctggattccaggacagtcgacgttctggatggcgaggctccc
aaatgggatgtatttgacgtgtgggcaagcgtgaaggctcgacgaaggagccacaggaca
gcagcgggcaacgacctccttgtggcctgctttgacctgctggtcgtttcagagttgacc
aaagaggcagccaaccctcttacagtagggctgcaacgccagtctcggcagccccaggag
agggccttgctggtggctttttctcgcacccgcaggaaagaaaacctgttcaaggagatc
agggagcagataaaggcagtgcgaggacacatgggttttctggatcctttgaacctctct
ggtgacgtggttggtcacctatccaggcgtcgcagacgccggactgccctgaccagcaga
tctataggtggagctggtgggggaggaggaggcgtcggtgttggaggaggaggaaggagt
ggtggaggcagcgggcgcaggaagactcgatgcagccgcaggcagctccacgtcaacttc
aaggagttgggctgggacgactggatcattgcaccgctggattacgaggcgcaccactgt
gagggcgtgtgtgactttccgctgcgctcacacctggagccaacaaatcacgccatcatt
cagacacttatgaactctatggaccctgactccagcccgcccagctgctgtgtcccctcc
aaactcagccccatcagcatcctctacattgactctggcaacaatgtggtctacaagcag
tatgaggacatggtggtggagagctgtggttgcaggtag
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