Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375126
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Entry
139375126 CDS
T10872
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139375126
04082 Neuroactive ligand signaling
139375126
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139375126
Ion channels [BR:
ocla04040
]
Ligand-gated channels
GABA-A
139375126
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
139375126
NCBI-ProteinID:
XP_070972711
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All DBs
Position
19:complement(37815301..37869065)
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AA seq
486 aa
AA seq
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MWTALDRGRWEIFCLFLMVAMVCGAQSANEPSNMSFVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADSLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGDNSVTGVENIELPQFSIIDYHIQSTKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKTNNENKSRLESNK
VQVDAHGNILLTNLEIRNEMGGMGGMAGMTGAEMIGALNDPRATMFSYDSASIQYRKPMA
SRDLYGRPALDRPVGHKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPIAFTFFNLVY
WMYYVH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtggacggctttggaccgcggacgctgggagattttttgtcttttcctaatggtcgcc
atggtctgcggcgctcaaagcgccaacgagcctagcaacatgtcatttgtgaaagcgacc
gtggacaaactgcttaaggggtatgacattcgtctgaggcctgattttggaggtgcccct
gtggacgttggaatgagcatagatatcgcaagtatcgacatggtttctgaagtcaacatg
gattacaccatcaccatgtacttccagcagtcctggagggacaagcgcttgtcctacaca
gggattcccctcaacctgacgctggacaacagggtggctgactcgctctgggtccctgac
acctacttcatcaacgataagaagtcctttgtgcacggggtcacagtgaagaacagaatg
atccgactgcatccagacggaactgtgctctacggcctcaggatcaccactacggcagct
tgcatgatggatttgcgtagataccctctggacgagcagaactgcaccctggagatcgag
agctatgggtacaccactgatgacatcgagttctactggaaaggtgataattcagtgact
ggggtggagaacatcgaacttccccaattctctattatagactaccacatccaatccaca
aaagcagtgtttgctacaggctcctacccgaggctctctctgagttttaagctgaagagg
aacattggctacttcatcctacagacctacatgccctccaccctgatcaccatcctatcc
tgggtctccttctggatcaactatgacgcgtctgcggccagagtcgctttaggtataacc
actgtgctgaccatgaccaccatcaacacccacttgagagagactttacccaaaatcccc
tatgtcaaggctatagacatctacctgatgggctgcttcgtgtttgtcttcctggccctg
ctggagtacgcgtttgttaactacatcttcttcggtcgggggcctcacttacagaaaaag
gtggcggagaaagcagctaaaaccaataatgaaaacaagagccgtctggagagtaacaaa
gtgcaggtggacgcccatggcaacatcctcctgactaatctggagatccgtaacgagatg
ggtgggatgggtggcatggccgggatgaccggggccgagatgataggggctctcaacgac
ccgcgggccaccatgttctcctacgacagcgccagcatacagtaccgcaagcccatggcc
agccgagacctgtatggtcgaccggccctcgaccggcctgtcggccacaagaagagtcgt
ttgaggaggagggcgtcgcagctcaaagtcaagatcccagacctgacggatgtcaacgcc
atagacaagtggtcccgcgtcatcttccccatcgcctttaccttcttcaacttggtctac
tggatgtactacgtccactaa
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