KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375136
Entry
139375136         CDS       T10872                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139375136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139375136
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139375136
Spliceosome [BR:ocla03041]
 Complex B
  Other components
   Prp19 complex
    139375136
 Complex C
   Prp19-CDC5 complex
    139375136
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    139375136
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 139375136
NCBI-ProteinID: XP_070972729
LinkDB
Position
19:complement(38350483..38372275)
AA seq 806 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGINAQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYEGLEPNFK
RLRQQHLDGELRNEKEEKERKRDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSLTNSAMATGLRTPKTPAA
QDKILQEAQNLMALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGP
GSEGSMTPQGGLTPKGPGTVTPGVTPGRTPLRDKLNINTEEQLADPAYAKHLQRESREQL
KLGLMSLPVPKNDFEIVLPENAETQLEEMETETGYIEDASEIELRRQAVRDAEREKELKL
RHTAVQRTLPRPSEVNESILRPMGTDPLSELQHAEEMIKKEMITMLHFDCLHHPPANQQR
SKQRGPSSTSNNAEHIAHLDRHPYQPISNEDLAQASELLSQEMEVVRAGMGHGDLSMEAY
SQVWEECYGQVLYLSAQSRYTRANLASKKDRIDSLEKKLEINRGHMTCEARRAARLERRL
KVLLGGYQSRAVGLLKQHGELWEQVEQAATELHTFTELKKQEDTAIPRRQEALREDVERQ
QEREKELQQRYGDLLLEKDALLSAKF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgccgcgtataatgatcaaggggggtgtatggcgaaacaccgaggatgagatcctgaag
gcagcggtgatgaaatatgggaagaatcagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaaacagtgcaaggcccgctggtatgagtggttggatccaagcattaagaaa
actgagtggtccagagaggaagaggagaaactactccatctggccaagctgatgccgacc
cagtggaggaccattgctcctatcataggacgcaccgctgcccagtgtctggagcactac
gagttcctgctagacaaagcggcccagagggacaatgaggaggatacagctgacgatcca
aggaaactgaaacctggtgagatcgaccccaaccctgaaaccaagcccgctaggcctgac
cctgtggacatggatgaagacgagctggagatgctttctgaggccagagctcgtctggcc
aacactcaggggaagaaagctaagaggaaagccagagagaaacagctggaggaggccaga
cgtctggctgctctacagaagcgcagggagttgcgggccgcaggcatcaatgcccagaag
aagaggaagaagaagagaggagtggactacaatgctgagatcccttttgagaagaagcct
tctcagggtttctatgacaccagcatggagctctacgaaggtctggaaccaaacttcaaa
cgcctgcgacaacaacacctggatggagagctacgcaatgaaaaggaagagaaggagagg
aagagggatagacagaagatcaagaagaagaaggagagtgatcttccatcagccatcctg
cagaccagcggagtagcagagttcaccaagaaacgcagcaaactggtgctgcctgcaccg
cagatctctgatgcggagctggaggaggtggtgaagctgggtcaggccagtgaagtggct
cgtcagaccgcagaggagtctgggatcactaactccgcctcctcagccctcctatcagaa
tacagcctcaccaacagcgctatggcaactgggctacgcacccccaagacccctgctgca
caggacaagatactacaggaggcccagaaccttatggctctgactaacgtagacacccct
ctgaaaggaggtctgaacactcctcttcaccagagtgacttctcaggagtcacaccccaa
agacaggcagtacagacacctaatactgtactgaccacacctttcaggacccccggtcca
gggtcagagggcagtatgaccccccagggaggtttaacccctaaaggacccggtactgtt
acccctggagtaaccccgggacgcacccctctacgagacaaactcaacatcaatactgag
gaacaactagcggatcctgcctacgctaaacatctgcaacgagagtcgagggagcagctg
aagctgggtctgatgtcgctgccagtcccgaagaatgactttgagattgttctaccagaa
aatgcagagactcaactggaggaaatggagacagagacgggatacatagaggatgcctcg
gagatagagctacgcagacaggctgttcgggacgcagagagggagaaagagctgaagctg
aggcacactgctgtacagaggactttacccagaccatcagaggtgaatgagtccatcctg
cgtccaatgggaacagatcctctgtcagagctgcagcatgctgaggagatgatcaagaag
gagatgatcaccatgctgcactttgactgtctacaccacccaccagccaaccaacagcgc
agcaaacaacgagggccttcctccacctccaacaacgcagaacacatcgcccacctggac
agacacccctaccagccaatcagcaatgaggatttggcacaggccagtgagttgctgagc
caggagatggaggtggtgagggcaggtatgggtcacggggacctgtccatggaggcctac
agccaggtgtgggaggagtgttacggccaggtgctgtacctctctgcccagagccgctac
accagggccaacctggcctccaagaaggacagaatagactccctggagaagaagctggag
ataaaccgaggccatatgacatgtgaggcccgtcgtgctgctcgtctggagcgccgtctc
aaggtgttactaggagggtaccagtcccgtgctgtaggcctactgaagcagcatggtgaa
ctgtgggagcaggttgagcaggcagctacagagctccacaccttcactgagctgaagaaa
caagaagacacagctataccccgcagacaagaggctctaagggaggatgtggagagacag
caggagagagagaaggagctgcaacagagatatggagacctgctgctggagaaagacgct
ctgctgtctgccaaattctaa

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