Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375148
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Entry
139375148 CDS
T10872
Name
(RefSeq) tumor necrosis factor alpha-induced protein 2-like isoform X1
KO
K19989
tumor necrosis factor alpha-induced protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139375148
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
139375148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec6
MC3
Motif
Other DBs
NCBI-GeneID:
139375148
NCBI-ProteinID:
XP_070972745
LinkDB
All DBs
Position
19:38588335..38601168
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AA seq
683 aa
AA seq
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MKLFRGLRDEAVMRTLRTRNTVLGTGSTEPNSSVEHSGKTTSDGRKFKPLTLPRILRRNS
KSNTNITAPDVPNTSSVIAAPLEELLTFEQNLERNCLSAAGQQLIEREERLYGQISEEVV
QSTTEWEKEEEQFTRDHKALLSQIDLAVKSSFSPDEGSLEALKSAVKAILQEEEQDRRWL
KQVGKQPAWRPSECRRHHNTVLQSLVEERMDNAELPPEENNKLRSSLQRDVCGKGRRLQE
DLLRVVKDVKGCYPEDMDICNFYGKMYHQAFSAGMRNIEEYGLGMDDCSYLLYWVNVAYP
EILQNPELTKEINPEMLGKLLTEELTTPLENQCLTHKETEVQTLINKVLMVEEQAWMEGS
VPELRDDCYFSPLAIDVIQFINAAVKSIETVLGAMSKVQIIVCLLKDFLNSYKKFQEKVL
KGSNNGNSRTVIMANLACVEQFRDYIVNKADIFPVDVKECCLSIVAEMKNIGYTFLTSPI
HKDLKSQYRDLGTPVWLEKKKQVFEKLFEGINKHTQDLKGLTDSCHQELLSQLHLEVTVE
YVRRLLKRKIKLRDKEMQEQAARSVCEDGQRLHKLFTEAGSREEWLSDILPKIAEVLKLQ
DISSIQLEIVTLSQAYPDLSEFQVSALLSLKSNLSASAVRRVKKTLLDNQDTTSSQDVPS
FFSKHPSFHSCGGLHESQFHHSA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatttcgagggttgagggatgaagcagtgatgaggaccctaaggactagaaac
acagtcttgggaacaggatccactgagccaaactcttcagtggaacacagtggaaagaca
acatcagatggaagaaagtttaaacctttaacattgccccggatcctaagacggaattcc
aagagtaacaccaacatcactgctccagatgtccccaacacatccagtgttattgctgcc
cctctggaggagttgttgacttttgagcagaaccttgagagaaattgcctgtctgctgct
ggccaacagctgattgagagagaggagcgtctatatggacagatctcagaagaggtggtt
cagtcgaccacggagtgggagaaggaggaagagcagttcaccagagatcacaaagccctc
ctcagccaaatagacctggctgtaaagagttctttcagtccagatgaaggcagtcttgag
gctctgaagtctgcagtgaaagctatcctacaggaggaggagcaggataggcgatggctg
aagcaggtgggtaaacagcctgcctggaggcccagtgagtgtagacgtcaccacaacact
gtcctccagagcctggtggaggagcgtatggacaatgccgaattgcctcctgaagagaac
aacaagctacgctcctccctgcagagggatgtctgtgggaagggcaggcggctgcaggag
gacctgctgagggtggtgaaggatgtgaagggctgctacccagaggacatggatatctgc
aacttctatggaaagatgtatcaccaagccttcagcgcagggatgaggaatattgaagaa
tatgggctgggcatggatgactgctcttacctcctgtattgggtgaatgttgcctaccca
gaaattctacaaaatccagaactgaccaaggagattaaccctgaaatgttaggaaagctg
ttgactgaggagttgacaacaccattggagaatcaatgtcttactcacaaagagacagag
gtgcagacattgatcaacaaagtgctgatggtggaggagcaagcctggatggaggggtct
gtgcctgagctcagagatgactgttactttagccccttggccatcgacgtaattcagttt
attaatgctgcagtgaaatcgatagagacagttttgggagccatgtccaaagtccagata
attgtgtgcctattgaaggacttcttgaatagctataagaaattccaggagaaagttctc
aagggaagcaacaatggaaacagcagaactgtgataatggccaatcttgcctgtgttgaa
caatttagggactatattgtaaacaaagccgatatcttcccagtggatgtaaaggaatgc
tgtctgtccatagtagctgaaatgaaaaacattggctacacatttttaacaagccctata
cacaaggatctcaagtctcagtacagagatctggggacgcctgtctggttggagaagaag
aaacaggtgtttgagaagctgtttgaaggaattaacaaacacacccaggatcttaagggc
ttgactgactcctgtcatcaggagctgctgagccagctgcacttggaggtgacagtggag
tatgtgaggaggctactgaagaggaagatcaagctgagagacaaagagatgcaggagcag
gcggccaggtcggtgtgtgaggatggccagagactacacaaactgttcactgaagcgggt
tccagggaggagtggctaagtgacatccttcccaagattgctgaagtgctgaaactccaa
gacatttcctccatacagctggagatagtgactctgagtcaagcttaccctgatctcagt
gaattccaggtgtccgccctgcttagcctcaaatccaacctttctgcctctgccgtgagg
agggtaaagaagacgctcctggacaaccaggacaccaccagctcccaggatgtcccatct
tttttctccaagcatccatccttccattcctgtggcggtcttcatgagagccagtttcat
catagcgcttga
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