Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375160
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Entry
139375160 CDS
T10872
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139375160
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
EGF_DL_JAG
JAG1
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
DUF1180
Motif
Other DBs
NCBI-GeneID:
139375160
NCBI-ProteinID:
XP_070972785
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Position
19:38915835..38943213
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AA seq
1251 aa
AA seq
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MWNCMGISNCLSIVCVLLTVWTEVSQSSGYFELQLIAVQNANGELSDGDCCDGERNTQDL
RCSSDECDTYFRVCLKEYQTDVTTTGLCIYGTGSTNVIGGNSFQFKSAKNNQNRNNDGGK
IVIPFQFAWPVSYTLIVEAWDWDNGTHSSSGEDLLIERSVRKERINPGDDRQTIQYNGLT
ASFEYSIRVRCDENYYGSKCNKLCRPRNDWHGHYVCDQFGNRGCMEGWMGTYCTTAICKQ
GCNLLQGVCSAPGECTCTYGWQGPFCDNCLPYPGCVHGTCVKPWQCTCEKNWGGLLCEKD
LNYCGTNKPCKNGGTCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCANGGTCHEVPS
GFECHCPAGWAGPTCAKDTDECASNPCAQGGTCIDMENGFECLCLPQWAGKTCQIDVNEC
MGKPCLNAYSCKNLIGGYHCACFRGWAGQNCDINVNSCHGQCQNGATCKEGQRGYVCACS
PGFVGRHCDIQRNSCASGPCRNGGRCHTLLDSFMCECPHGYTGTTCEVQSNPCSPNPCQN
QAQCHSLMDDFYCACTDDFEGKTCSELKDHCKTNPCEVIDSCTVAVATNGTQEGVWHISS
NVCGPHGRCISQPAGNFTCSCEPGFTGTYCHENINDCVPPPCKNGGTCIDGISSFKCFCP
DGWEGTLCDMDVNECSRNPCKNGGRCVNLLNHFYCQCQDNWKGKTCHSRESQCDSSTCSN
GGTCFDHGDTFRCTCLSGWVGSTCNTAKNSTCDSNPCENGGTCVGGGDAYTCICKDGWEG
PTCAHNANDCNPQPCYNGGVCVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAYGSTCV
DEINSFLCVCPLGRAGPHCQELIGIGKACRYSGLQFPHGSRWEEECNTCQCVNGIVRCSK
VRCGRRPCLLQRDGAGPDSSALCPRGQECVEHQFLTCFAKPCHQWGVCSTPDPPPPLHTQ
CEPNSGYLDNSCARITLIFNRDKVPQGTTVENICSELRYLPIAQTLAKDCTLLILCDLSY
SNSDAVEVAMSYDQDGQEQNGDRGQIQEAASAIVGALSKRHNSTVMLAVVEVKVETQVMP
QSVDHLVPVLCVVFSVLWIFCIVVCVWWTRKRKKERERESAAEDSTVNNQLEPLRVSLPQ
HKDNRGKDIQHECKKLMNPPDRTCDGAEGDEEEDGEEEELRRGGMELDKFSTQKCSLAGA
QDKVMGKGGVICTTHSAPVKPPHRTAYSPKDNRCKNLNAANVSEDVKDHYV
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtatggggatttcgaattgcctgtcaatagtgtgtgttcttctgaccgtg
tggactgaggtgtcccagtcctcgggctattttgagctgcagctgattgcggtacagaac
gcaaatggtgagttgtcggacggggactgctgcgacggagaaaggaacacgcaggatctc
cgctgtagcagcgatgagtgtgatacgtacttcagagtgtgtctaaaggaataccaaacg
gatgtcacgaccacgggcttgtgcatctatggaactggatctactaacgttatcggtgga
aatagttttcaatttaagagcgccaaaaacaaccaaaaccgaaacaacgatggtggaaag
atcgtcatcccattccagttcgcttggccggtttcctacactctgatcgtggaagcgtgg
gactgggacaatggtacacacagcagcagtggtgaggatctgttgattgagcgaagtgtc
cgtaaagaaaggatcaaccctggagatgacagacagactatccaatacaacggtcttaca
gccagctttgagtacagcatccgcgtgcgctgtgacgagaactactatggcagcaagtgc
aacaagctgtgccggccacgtaatgactggcatggccactacgtgtgtgaccagtttggg
aatagaggatgtatggagggctggatggggacttactgtacaactgctatctgcaagcag
ggctgcaacctgctgcaaggagtctgcagtgccccaggagaatgcacgtgtacgtacggg
tggcagggtccattctgtgacaactgcctgccatacccaggctgtgtccacgggacctgc
gtcaagccctggcagtgcacctgtgagaagaactggggaggcctgctgtgtgaaaaagat
ctgaactactgtgggacgaacaagccgtgtaagaacggaggaacgtgtatgaacacggag
ccagatgagtacaactgtgcctgtcctgacggctactcaggcaaaaactgtgagatagcg
gaacacgcctgtgtgtctaacccctgtgccaacgggggcacctgccacgaggtaccgtct
gggtttgagtgtcactgtcctgcaggctgggcagggcccacctgcgctaaagacacggac
gagtgtgcatccaacccctgtgctcagggtgggacctgcatcgacatggagaacggattt
gagtgcctctgcctcccacagtgggctgggaagacctgccagatagacgttaatgagtgt
atggggaagccttgcctcaatgcttactcttgcaaaaacttgattggtggatatcactgt
gcctgctttcgaggatgggccggccagaactgtgacatcaatgtcaacagctgccatgga
cagtgtcagaatggagcgacttgcaaggaggggcagagaggctacgtgtgtgcctgctca
ccggggtttgtgggccggcattgtgacatccagaggaacagctgtgccagcggcccatgt
aggaacgggggcaggtgtcacaccctgctggacagcttcatgtgcgagtgcccacatggg
tacactggcaccacctgtgaggtgcagagcaacccgtgcagccctaacccgtgccagaac
caggcccagtgtcacagtctgatggatgacttctactgtgcctgcactgacgactttgag
ggcaagacctgctctgagctcaaggaccactgtaagacaaatccctgtgaagtgattgac
agttgtactgtcgccgtggccaccaatggcacacaggaaggggtgtggcacatctcgtcc
aatgtgtgcggcccacacggacgctgcatcagccagcctgctgggaacttcacctgttcc
tgtgaaccgggcttcactggaacatactgtcacgagaacataaacgactgtgtgccgcct
ccctgtaagaatggaggaacctgcattgacgggatcagctctttcaagtgcttttgccct
gacggctgggagggcacgctgtgtgacatggatgtgaatgagtgcagtaggaacccctgt
aagaacggaggtcgctgtgtgaacctgctcaaccacttctactgtcagtgccaggacaac
tggaaaggcaagacctgccactcacgtgagagccagtgtgattccagtacctgcagtaat
ggagggacatgcttcgaccacggggacaccttccgctgtacctgtctctcagggtgggtg
ggaagcacctgtaacacagccaagaacagtacgtgtgactctaacccgtgtgagaatgga
gggacctgtgtcggagggggtgatgcctacacctgcatctgcaaggatggctgggagggg
cccacatgtgctcacaatgcaaatgactgcaatcctcaaccctgctataacggtggtgtc
tgtgtggatggcgtgaactggttccgctgtgagtgtgccccgggattcgccggaccagac
tgccggatcaacatagatgagtgccagtcatcgccctgtgcctatggttctacctgtgtg
gatgagataaacagcttcctctgtgtgtgtcccttgggccgggctgggcctcactgccaa
gagttgatagggatcgggaaggcctgtcgttactccggcctgcagtttcctcacggcagt
cgatgggaggaggagtgtaatacctgccagtgtgtcaatggcattgtgcgctgttctaag
gtacggtgtggccgacggccctgcctgctgcagagagatggtgccggtccagacagtagt
gccctgtgtcctagaggacaggaatgtgtggaacaccaattcctcacctgcttcgccaag
ccctgccaccagtggggcgtgtgttccacccccgacccccctccgcccctccacacccag
tgtgaacccaacagtggttaccttgacaacagctgtgcccgcatcacactcatctttaac
agagacaaagttccacagggcaccactgtggagaacatctgctcggagctgaggtacctt
cccatcgcccagaccctggctaaagattgcacactcctcattctctgtgacctgtcctac
tccaacagtgacgccgtggaggttgccatgtcatatgatcaggatggtcaggagcagaat
ggagaccgtggtcagatccaggaggctgccagtgccatcgtcggtgccctgtccaaacgc
cacaacagcactgtcatgctggccgtggtggaggtcaaagtggagacgcaggtcatgccc
cagtctgtggaccacctggtgccagtgctgtgcgtggtgttcagtgtgctgtggatcttc
tgtatcgtggtgtgtgtgtggtggacccgtaagaggaagaaagagcgtgagagagagtct
gcagcagaggacagcaccgtcaacaaccagctggagccactgagggtcagcctgccacag
cacaaagacaaccgaggcaaagacattcagcacgaatgtaagaaactcatgaaccctcca
gaccgaacgtgtgacggggctgagggagacgaggaggaggacggagaggaggaggagctg
aggaggggggggatggagctagacaagttctccacccaaaagtgctccttggcaggagcg
caggacaaagtgatgggcaaagggggagtgatctgtacgacgcatagtgcccctgtcaaa
cccccccaccggacagcgtacagcccgaaagacaaccggtgtaaaaacctcaacgctgcc
aacgtcagtgaagacgtcaaagaccattatgtatga
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