Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375163
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Entry
139375163 CDS
T10872
Name
(RefSeq) estrogen receptor beta-like isoform X1
KO
K08551
estrogen receptor beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
139375163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139375163
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139375163
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
139375163
Nuclear receptors [BR:
ocla03310
]
3. Estrogen like
3A. Estrogen receptor
139375163
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
139375163
NCBI-ProteinID:
XP_070972803
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Position
19:39007575..39039655
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AA seq
646 aa
AA seq
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MTGLAADQTTKWQDFSLTGPGEEGNRRQQQPQRQPNVIPSMACSPESGTDISSLLQLQDV
GSSKVQERGSSPGLLPALYSPPSGMESRTFCIPSPYTDNSHDYSHSHGPLAFYNPSMLGY
SRPPISDSPSLCPPLSPSLFWPNHGHGQQNMPSLTLHCPQPLVYSEHNPHTPWVEPKPHG
LSPSSPLLHPTKLLGKRLEDGEEVNSSSASCVVVKADMHFCAVCHDYASGYHYGVWSCEG
CKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMMKCGVRRERCSYRG
ARHRRVPQGRGASGGLVGVGTRAQMRLEGGSHPQLEVHHSSLTPEQLISCIMEAEPPEIY
LMEDLKKPFTEASMMMSLTNLADKELVLMISWAKKIPGFVELSLTDQVHLLECCWLEVLM
LGLMWRSVDHPGKLIFSPDLKLNREEGNCVEGIMEIFDMLLAATSRFRELNLQREEYVCL
KAMILLNSNICSTSPERAEDLESRGKLLRLLDSVTDALVWAISKRGLSFQQQSSRLAHLL
MLLSHIRHVSNKGMQHLSSMKKKNVVLLYDLLLEMLDANTTHSSRMSSTHDPSNNDPTEP
PAAPAPAVDTQLLLTFQNPEESQTLESISTSSQGAGQPREGRCVPQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcttggcagcagatcaaactacaaagtggcaggacttctcactgactggtccc
ggtgaggaaggcaatagacgacagcagcagccacaacgtcagcccaacgttatccccagc
atggcatgttctcctgaaagtgggacagacatttcttccctgctccagctccaggatgtg
ggctccagcaaggtccaagagagggggagctccccgggactcctacccgccctctacagc
cctccgagcggcatggagagccgcacattctgcatcccctctccctacacagacaacagc
catgattacagtcacagccacggacccctagccttctacaacccctctatgctcggctac
agcagaccacctatctccgacagcccttctctatgtccacccctcagtccctctctcttc
tggcccaaccatggccacggccagcaaaacatgccctcgctgaccctgcactgcccccag
cccctggtgtacagtgagcataacccccacaccccctgggtggagcccaaaccccacggc
ctcagccccagcagccctctcctccaccctaccaagctgctggggaagagactggaggac
ggagaggaagtgaactcctcctcagccagctgtgtggtggtgaaggcagacatgcacttc
tgtgccgtgtgtcatgactacgcttcgggctaccactacggcgtgtggtcttgtgagggc
tgcaaggccttcttcaagaggagcatccaaggccacaatgattacatttgtccagcaact
aaccagtgcactatcgacaagaaccgccgtaaaagctgccaggcctgccgcctacgcaag
tgttatgaagtgggcatgatgaagtgtggtgtgaggcgagagcgctgcagttaccggggg
gcgaggcaccggcgtgtacctcaggggcggggggcgtcaggcgggctggtgggggtaggg
accagggcccagatgcgtctggaggggggctcccacccccagctggaggtgcaccactcg
tccctgaccccagaacagctgatctcctgcatcatggaagcggagccgccagagatctac
ctgatggaggacctgaagaagcccttcactgaggccagcatgatgatgtcacttaccaac
ctggccgacaaggagttggtcctcatgatcagctgggccaagaagatccctggctttgta
gagctaagtctgacggaccaggtgcacctgttggagtgttgctggctggaggtgctgatg
ctgggtctgatgtggaggtctgtcgaccaccctgggaaactcatattctcaccagaccta
aagctcaacagggaagagggaaactgtgtggagggcattatggagatatttgacatgctg
ctggcagccacctctaggttcagggagctgaaccttcagagggaggagtacgtctgtctg
aaagccatgatcctcctcaactccaacatctgctctacctctccggagagggcagaagat
ctggagagcagggggaagctgctgcgtctgctggactcagtgacggatgccctggtgtgg
gccatctccaaacgaggcctgtcattccagcagcagtcatcccgcctggcccacctcctc
atgctactctcacacattcgccacgtcagtaacaaaggcatgcagcacctctctagcatg
aagaagaagaatgttgtgctgctctatgacctgctcttggaaatgctggacgccaacaca
acccacagcagccgtatgtcctcaactcatgacccctctaacaatgaccccacagagccc
ccagcagcaccagctcctgctgtagacactcagctcctgctaacattccaaaacccagag
gagagccaaacactcgagagcattagtacatccagccagggtgctggccagccgagagag
gggagatgtgtacctcagtaa
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