Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375390
Help
Entry
139375390 CDS
T10872
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139375390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139375390
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
139375390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
Ank_4
Ank_5
SH3_1
Ank_3
SH3_2
SH3_9
PH_2
Motif
Other DBs
NCBI-GeneID:
139375390
NCBI-ProteinID:
XP_070973227
LinkDB
All DBs
Position
19:55852543..55929277
Genome browser
AA seq
1028 aa
AA seq
DB search
METCVFDTFTNFCKSSVGPLYLERNMPERINISEFVALTNEDLASPATSSFQSKMSECRN
TVSAVEESLEMDQSTLQRMKKMIKAIHSSGLSHVENKEQYIEVLENLGNSHLTQDNNEVS
TGFLNMAVFTREVTSLFKNLVQNLNNIISFPLENVLKSELRDSRLELKKQLEKSWKDYDI
KVGKLEKERREKSRQPGLIRMEGSDVTEDMERERRTFQLQMCEYLLKIQELRVRQGPDLL
QSLIKYFQAQLNFFQDGLKAAENLSPFVEKLATSVHMVRQDQDEEVRQLSQLRDSLRLLL
QMEGKEEYLTRKNSGNGYSIHQPQGNKKYGTEKSGFLQKRSDGIRKVWQKRKCGVKYGCL
TISHSTINRPPAKLNLLTCQVRPNPDERRTFDLVTHNRTYHFQAEDEQECMIWVSVLQNS
KEEALNTVLGGDQPQFQDSGLQELARAVITELRHMPGNEACADCGAHDPTWLSTNLGILT
CIECSGIHRELGVHYSRIQSLTLDMLSTSELLLAVSIGNTRFNDIMEANLPNDSIKPLPQ
SDMNARKEYIVAKYVDRRYVLHRDREDGEPWRVYDAVRSRDLTALLQLYAQGEDLAKPLA
LPEGQHLRETALHLAVRLEERSSLSLVDFLIQNSVCLEKRTLEGNTALHYSAQHHKTECL
KLLLKGKAVLHTVNSSGETALDIARRLQHSQCVELLELAQSGKFNSQIHVEYMWETQSQD
LYDSEDDLDERVNPLHRNLRSPLPSKASPSRWSFANAPVACKTYENVDFLYRNPPNSAPS
GVLMPPPPLPAKAIMRGRSDPQISLSTQEGVSSRCSCSNPTPQSSPPSPMLEGQGGRPPK
SPHGQGILVRGQRQTAAWEGQANTGSGSSDRDSTKSNSSSSSPQNHIGPVSSEKTTSYRR
TSSGGQGKCSAAVTSAVTSPSCVALGSQEELYCSVVTSGPAPSVTPAAKSTTSSSPITVR
PRRNAMVSQRRPTQKRVKALVDCRAVSSDQLAFFKDEVIVVTATEDPHWWEIHNIMEKPG
MVLWDKHD
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatgcgtttttgacacttttactaacttttgtaaatcttcagttggacccctt
taccttgagagaaatatgccggagcgtatcaacatttcagagtttgttgctctgacaaac
gaggacttggcttcaccggctacctcgagttttcagtccaaaatgagtgaatgtcggaac
accgtttcggcagtcgaagagtccttagagatggaccagagcaccttacagaggatgaag
aagatgatcaaggccatccacagctctggactaagtcatgtggagaacaaggagcagtac
atcgaggtgctggagaacctggggaacagtcacctgacccaggacaacaacgaggtgtcc
acaggattcctcaacatggccgtcttcaccagggaggtcacctctctcttcaagaacctg
gtccagaatctgaacaatataatctcctttcccttggagaatgtcttgaagagtgagctt
agagacagcagactggagttgaagaaacagttggagaagagctggaaggactatgacatc
aaagttgggaagctggagaaggagaggagggagaagagccgtcagccgggcctgatcagg
atggagggatccgacgtgacggaggacatggaacgagagaggaggaccttccagctgcag
atgtgtgagtatctactgaagatccaggagctgagggtacgtcagggtccagacctgctc
cagagtctcatcaagtacttccaggcccagctcaatttcttccaggacggcttgaaagct
gccgagaaccttagtccctttgtggagaagctggctacatcagtgcacatggtgcgtcag
gaccaggatgaagaggtgaggcagctctctcagctacgagactccctaagactgctgcta
cagatggaggggaaagaggagtacctgaccagaaagaactctggtaacggctacagcatc
caccagcctcaaggcaacaagaagtacggtacggagaagtcaggcttcctacagaagagg
agtgacgggattaggaaggtgtggcagaagaggaagtgtggtgtcaagtacggctgtctg
accatctctcacagcacgatcaaccgaccaccagcgaagctcaacctcctgacctgtcag
gtgcgccccaaccccgatgagaggaggacctttgacctggtcacacataatcggacgtac
catttccaagccgaggacgagcaggaatgcatgatttgggtgtcggtgctgcagaacagt
aaggaggaagccctgaacacagtgttgggaggggaccagccgcagttccaggactccggg
ctgcaggagctggccagggcagtcatcaccgagctcagacacatgcccggcaacgaggcc
tgcgccgactgtggagcccacgaccccacgtggctctccaccaacctgggcatcctgacg
tgtatagagtgttctgggatccacagggagttgggagtccactactccaggatccagtcc
ctcacgctggacatgctcagcacctccgaactactactggcagtcagtataggcaacacc
cgcttcaatgacatcatggaggccaatcttcccaatgattccatcaaacccctcccccag
agtgacatgaatgccaggaaggagtatatcgtggccaagtacgtggaccggcgctacgtg
ctgcacagggaccgggaggacggtgagccttggcgtgtgtacgatgccgtgaggagccgg
gacctgaccgctctgctgcagctgtacgcccagggagaggacctggccaagccgctagca
ctgcctgagggacagcatctgagagagacagctcttcacttggctgtgagactggaggag
aggagctctctatccctggtggacttcctcatacagaacagtgtctgtctagagaagagg
actctagaggggaacactgctctacattacagcgcccagcaccacaaaacagagtgcctc
aaactactcctcaaaggaaaggctgtcctacacacagtgaactcatccggagagacggcc
ctggacatcgccaggagactgcagcactcccagtgtgtggaactgctagagctggcccag
agtgggaagttcaacagtcagatccatgtggagtacatgtgggagacacagagccaggac
ctgtacgacagcgaagatgacctggatgagagggtgaaccccttacacaggaacctacgc
tcccctctgccctccaaagcctcgccctcccgctggagcttcgccaacgcccctgtggcg
tgtaagacctatgaaaacgtggacttcctttaccgtaacccccccaatagtgctccatct
ggcgtcctcatgcccccgccccctctgcccgctaaagccatcatgagaggtcgctcggac
ccccagatctccttgtccacccaggagggggtaagcagcaggtgcagctgctccaaccca
accccccagtccagccccccttcccccatgctggagggtcaggggggacgaccacccaaa
tcaccccacggccagggcatcctggtgagggggcagagacagaccgcagcctgggagggt
caggccaatactgggtcagggtcctcagacagagacagcaccaagtctaacagtagttcc
agctcccctcagaaccacataggacctgtcagctcagagaaaacaacatcgtacaggcga
accagcagtggaggacaagggaagtgttctgcagccgtgacctcggctgtgacctcaccc
agctgtgtggcgctgggcagccaggaggagctgtactgcagcgtggtaactagtggtccc
gctcccagcgtcacacctgcggccaaatccaccacctcctcctctccgatcactgtgcgc
cctcgcagaaacgctatggtgtctcagaggaggcctacccagaagagggtcaaggccctg
gtggactgcagagccgtcagctcggaccagctggccttcttcaaggatgaggtcatcgta
gtcacagccaccgaggacccccactggtgggagatacacaacatcatggagaaaccaggc
atggtactctgggacaaacatgactag
DBGET
integrated database retrieval system
