Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375409
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Entry
139375409 CDS
T10872
Name
(RefSeq) transcriptional repressor protein YY1-like
KO
K09201
transcription factor YY
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139375409
03083 Polycomb repressive complex
139375409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139375409
03036 Chromosome and associated proteins [BR:
ocla03036
]
139375409
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139375409
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139375409
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
139375409
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
139375409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
C2H2_ASCIZ
DUF4114
IBR
Raffinose_syn
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
139375409
NCBI-ProteinID:
XP_070973269
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Position
19:complement(57290076..57296037)
Genome browser
AA seq
355 aa
AA seq
DB search
MASGDTLYIETDGSEMPSEIVELHEIEVETIETTVVGEDDDEQPMIALQPLDSDDPHSMH
HHHQEVILVQTREEVVGEDDSDMHGDDDYEDQILIPVPVPAAEEEYIEQTLVTVAGKSSG
RTKKGGSGKRNKKNYLGAPESSGRKWEQKQVQIKTLEGEFSVTMWASDDKKDVDHDTMVE
EHVIGDNSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDSPRTIACP
HKGCSKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG
CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggtgataccctgtacatcgaaacggacggctcggagatgccgtcagaaata
gtggaactccatgaaatcgaagtggagacaatcgagacaacagttgttggagaggacgac
gatgaacagcctatgatcgctttacagcccctcgactcagatgatccacactcaatgcat
caccatcaccaggaggtaatattggtgcaaactcgagaagaggtggttggtgaagatgat
tcggacatgcacggggacgatgattacgaggaccaaattcttatacctgtcccagtccct
gccgccgaagaggaatacatcgaacagactctggtgactgtcgctgggaagagctcgggg
cggacgaagaaggggggaagcgggaagagaaataaaaagaactacttgggtgcaccggag
tccagtggtagaaaatgggaacagaaacaagtccagataaagactttggaaggagagttt
tcggtgacgatgtgggcatcggatgacaagaaggatgttgaccatgacactatggtagag
gagcatgtcattggggataattctcctcccgattactcggagtacatgacagggaagaag
ctcccgcccggaggcattccaggcatcgacctgtcagaccccaaacagctggcagagttc
gctaggatgaagccacggaaaatcaaggaggacgactctcccaggacgatagcttgccct
cacaaaggatgcagtaaaatgtttagggataactctgcaatgaggaagcacctgcacacc
cacggaccacgtgttcacgtctgcgctgaatgtggaaaggcctttgtcgaaagctccaaa
ctgaagaggcatcaacttgttcataccggcgagaagcctttccaatgcacatttgagggc
tgcggaaagcggttctccctggactttaacttacgcacacacgtgcggattcacactgga
gaccgaccctacgtctgtccgtttgacggctgcaacaagaagtttgcccaatccaccaac
ctcaagtctcacatcctcacacacgcgaaagctaaaaacaatcagtga
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