Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375439
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Entry
139375439 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2a
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139375439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139375439
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139375439
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Glycoprotein
Motif
Other DBs
NCBI-GeneID:
139375439
NCBI-ProteinID:
XP_070973325
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Position
19:59056640..59064482
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AA seq
475 aa
AA seq
DB search
MMTTNVWLKQEWSDYKLRWRPSDYDNVTSIRVPSELIWVPDIVLYNNADGEFSVTHMTKA
HLFHSGHVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDRAKIDLEPIGDTVDLK
DYWESGEWAIVNAVGTYNTKKYDCCHEIYPDITYYFMIRRLPLFYTVNLIIPCLLISCLT
VLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSI
VITVFVLNVHHRSSATHTMPRWVRTLFLSVIPRWLCMKRPPPDLRRRGLVGKLHPFGTFR
TPGPSRSSSHSTAHTWLMRESDVDLHGNEDEDVIRRGYLDTEMDAGLGVGLRLPPSFSFP
PPSPRLPVYTPLIPKTHTTQRPPNLSLTPDWDYNPPGPDVGMAPAPALSPAVLRALEGVM
YIAEHLRAEDQDFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGLFLPPWLAGMI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaccaacgtgtggctgaaacaggagtggagtgactataaactgcggtggcgt
ccatctgactacgacaacgtaacgtccattagagtaccttctgaactgatctgggtacct
gacatcgtcctctataacaatgcggatggtgagttttcagtgacccatatgaccaaggct
catctgttccatagtggtcatgtgcgctgggttcccccggccatctataagtcctcctgc
tctatagacgtcaccttcttccccttcgatcagcagaattgtaaaatgaagtttggctcc
tggacctacgacagagctaagatagatctagagcctataggggatactgtggatctgaag
gactactgggaaagtggtgaatgggctatagtgaacgcagtgggaacctacaacactaag
aagtacgactgttgccatgagatctaccctgatataacctactatttcatgatcagacgc
ctgcctctattctacactgtcaacctcattatcccttgtctcctcatctcctgtctcacc
gtcctggtgttctatctgccttctgattgtggagagaagatcaccctgtgtatctccgtc
ttactttctctcaccgtcttcctgctgctcatcactgagatcatcccctccacctcccta
gtgattcctctcattggggaatatctccttttcaccatgatctttgtcactctgtctatt
gttataacggtgtttgtcctgaacgtccatcatcgttcctctgctactcacaccatgcct
cgctgggttcggacactgttcctgtctgtcattccccggtggctctgcatgaaacgaccc
ccacccgatctcaggaggaggggcttagtcggcaaactccaccctttcggaaccttcaga
acgcctggcccctcccgctcttcgtcgcattccacagctcacacctggctcatgcgggag
tctgatgttgatctccatggtaacgaggacgaggatgtgattcgccgtggttacttggat
acggagatggacgcggggttaggggtagggctgaggcttcccccatccttctcctttccc
cctccctctccccgcctgccagtctacacccccctcatccccaagactcacaccacccag
cggccccccaatctgagtctgacccccgactgggactacaatcccccagggcctgatgtt
ggtatggccccagctccagccctgtctcctgcagtgttacgagccctggagggggtgatg
tacatcgctgaacacctcagagccgaggaccaagacttctctgtgaaggaggactggaag
tacgttgccatggtgatagatcgtatcttcctttggatgttcatcatcgtgtgtctcctg
ggaaccatcggattgttcttaccaccctggctggccggcatgatctag
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