KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375457
Entry
139375457         CDS       T10872                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 5
  KO
K11800  DDB1- and CUL4-associated factor 5
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139375457
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     139375457
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 EIF3I WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR41
Other DBs
NCBI-GeneID: 139375457
NCBI-ProteinID: XP_070973363
LinkDB
Position
19:61157936..61189824
AA seq 862 aa
MRNRKLARLTAPGKMKEVKGCGMRSSVGFLSQRRLFGNPLMKEEFQRLRLAGCTSLYKKD
MLGHFGCVNAIEFSNNGGEYLVSGGDDRRVLLWNMERALHARSAKPLKLKGEHLSNIFCL
AFDSTNKRVFSGGNDEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRV
LIWDTRERPHGEPFCLANYPSAFHSVMFNPAEPRLLATANSKEGVGLWDIRKPRTSLLRY
GGSMSLQSAMSVRFNSAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCF
AGDEDQYILSGSDDFNLYMWRIPKDPEAGGPGRVVNGASMVLKGHRSIVNQVRFNPSTYM
ICSSGVEKVIKAWSPYQQTESLGDLDSRVEDKSRSLYSHEEYINLVLNSGSGLSHDYVSQ
SIQEDPRMMAFFDSLVRREIEGWSSDSDSDLSEGAILQLHARGRRSTRAIRDAAGVLVGS
GVATPVPPSAAATADSDHSSSSSLAAPETSGAEHPEGVEPPQPRRRGSRYQQSVFLLDLV
GEDSDSSGFWPDPMPRPRSPSPRDNSTLSSPTSSPAGASSSSSSSTSSTSSEDEEQRRAS
RRQRTAARWRRMHFPRLSSGGRPESAQALYPGGVDSCSYPKISIDEASSSSASSTELQQD
QVQIGPHRSGSKTGRRKSHTLPGSSPAVSLDSQDDRAEQEGLLIASLLSQDALQQRNESW
AGRVGERRAALERMAEGLDSPEEADESDHSRWISPSSRHHSPGLNGLQHLDMTEVPVGCR
GRLAPDLFESSDSEGERETLELKSAGTRTLVEEEEEGEDGGSSSSQRGPAQGALKRTHLG
SRGQGSGEGSGGSETSEKKFKT
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgaggaatcgcaagctggctaggctaactgctccaggaaaaatgaaggaggtgaagggt
tgcggtatgcggtcctccgtgggctttctgtcccagagaaggctcttcggtaacccgctg
atgaaggaagaatttcagagactccggttggcaggatgcacaagcctttacaagaaagac
atgctgggacatttcgggtgtgtaaacgccatagagttttccaacaatggaggagaatac
cttgtgtccggaggggatgaccgcagggtgttactatggaacatggagagagctcttcat
gcccgctcagccaagcctctcaaactgaagggagaacacctctccaacatcttctgtctg
gcatttgacagcaccaacaaaagggtgttttctgggggcaacgatgaacaggtcatcctt
catgatgtagaacgaggcgagactctgaacgtgttccttcacgacgatgcggtgtacggt
ctgtcagtcagccccgttaacgacaacgtgttcgccagctcctcggacgacggacgggtc
ctcatctgggacacacgggagcgtccacacggagagcccttctgtctggccaactaccca
tcagccttccacagtgtgatgttcaacccggcagagccccgactgctggctacagccaac
tccaaggaaggggtggggctgtgggacatacgcaaacctcgcacttctctgctgcggtac
ggcggcagcatgtccctccagagtgccatgtcggtgcgttttaacagcgcagggacccag
ctcctggccttgcgtcgcaggctaccgccggtcctctacgagctacactctcgcctaccc
agcttccagttcgacaaccagggctacttcaactcctgtaccatgaagagctgctgcttc
gctggagacgaggatcagtacatcttgtctggatcagatgacttcaacctttacatgtgg
agaatccccaaggatcctgaagcaggaggcccgggtcgtgtggtcaacggagcgtccatg
gtcctgaaaggtcaccgttccatcgtgaatcaagtccggtttaaccccagcacttatatg
atctgctcctccggggtcgagaaggtcatcaaggcgtggagcccctaccagcagacggag
agtctgggagacctggatagtcgtgtggaggataagtccaggagtctgtacagccacgag
gagtacatcaacttggtcctgaacagcggcagcggcctgagccacgactacgtctcacag
tccatccaggaggatcctcgtatgatggccttctttgactctctggttcgtcgggagatc
gagggctggagttcggactcagacagtgacctgagtgagggggccatcctgcagctccac
gccaggggacgacgctccacacgggctataagagacgccgccggggtcctggttgggagt
ggagtcgccacgcctgtaccgccctctgctgctgctactgccgactcggaccactcctca
tcgtcctcattagctgcacccgagacctcgggggcggagcatcctgaaggggtggagcca
ccgcagccgaggaggcgtggcagcagatatcagcagtcggtgttcttattggacctggtg
ggagaggactctgactccagtggattctggccagaccccatgcctcggcctcgctctccc
agcccccgagacaactccaccctctccagccccacctcgtcccccgccggcgcctcctct
agctcctcctcttccacctcctccaccagctctgaggacgaggagcagaggagagccagt
aggagacaacgtactgcagcccggtggcgccgcatgcatttcccccgcctgtccagtggg
gggcgccccgagtccgcccaggccttgtaccccgggggggtcgactcctgctcctacccc
aagatctcaatcgacgaggcctcatcctcctccgcgtcctccacggagcttcaacaggac
caggttcagatcggaccccacagaagtggctctaaaacggggagacgcaagtcgcacacc
ctccctggttctagccctgcggtgtctctggacagccaggacgaccgagcggagcaggag
gggctcctcatcgcctcccttctgtctcaagacgccctgcagcagaggaacgagtcctgg
gcaggaagggttggggagaggagggctgctttagagaggatggccgagggcttagatagt
cctgaagaggccgacgagtcagaccatagtcgctggatctcccctagttccagacaccac
agccctgggctgaacgggctgcagcaccttgacatgactgaggtgccggtaggctgtagg
ggtcgcctggctccagacctatttgaatcctcagactccgagggagagagagagacctta
gagttgaaatcagcaggcactaggaccctggtggaggaggaggaggagggggaggacggc
gggtcgtcgtcgtctcagagaggcccagcccagggtgcgctgaaacggactcaccttggg
tcaagaggtcaagggtcaggggaggggtcaggggggtcggagacctcagagaagaagttc
aagacatga

DBGET integrated database retrieval system