Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375458
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Entry
139375458 CDS
T10872
Name
(RefSeq) alpha-actinin-1-like isoform X1
KO
K05699
actinin alpha 1/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04517
IgSF CAM signaling
ocla04518
Integrin signaling
ocla04519
Cadherin signaling
ocla04520
Adherens junction
ocla04530
Tight junction
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139375458
04518 Integrin signaling
139375458
04519 Cadherin signaling
139375458
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139375458
04520 Adherens junction
139375458
04530 Tight junction
139375458
09142 Cell motility
04810 Regulation of actin cytoskeleton
139375458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139375458
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139375458
04147 Exosome [BR:
ocla04147
]
139375458
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139375458
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139375458
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139375458
Exosomal proteins of colorectal cancer cells
139375458
Exosomal proteins of bladder cancer cells
139375458
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
Motif
Other DBs
NCBI-GeneID:
139375458
NCBI-ProteinID:
XP_070973365
LinkDB
All DBs
Position
19:61209693..61312851
Genome browser
AA seq
896 aa
AA seq
DB search
MPTFDMDPYDGDENDYMPQEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIE
EDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALHYITSKGVKLVSIGAEEIV
DGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDG
LGFCALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEK
AIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPW
LENRAPENTMLAMQQKMEDFRDYRRQHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPS
EGKMVSDVSNAWGGLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAATHEAWTEGKEEM
LQARDFETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNSRC
QRICDRWDALGALTQKRSDALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTF
IVHTIEEIQGLSTAHEQFKATLPDADKERGAILGIHNEIAKIVATYHVNMAGTNPYTTIN
PQGINAKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRI
SIEMHGTLEDQLTHLRQYEKNIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVG
WEQLLTTIARTINEIENQILTRDAKGISQDQMNEFRASFNHFDRDHSGTLGAEEFKACLI
SLGFDIANDAQGEAEFSRIMSIVDPNRVGVVTFQAFIDFMSRETADTDTADQVMASFKVL
AGDKNFIMADELRRELPPDQAEYCIARMAPYSGTDAVPGALDYMSFSTALYGESDL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcctactttcgacatggacccgtatgacggagatgaaaacgattatatgcctcaggaa
gatgactgggaccgggatatgctgttggacccggcgtgggagaagcagcagagaaagacg
ttcacggcctggtgtaactcccacctgaggaaagcaggaacgcagatcgagaacatcgag
gaggacttcagagacggactgaaactcatgctgctgttggaggtcatatcaggagagcgc
ttggccaaaccagagagagggaagatgagagttcacaagatctccaacgtcaacaaagct
ctccactacatcaccagtaaaggagtcaagctggtgtccatcggagctgaggagatcgtc
gacggcaatgctaaaatgaccctgggaatgatctggaccataatccttcgcttcgccatc
caggatatctctgtggaagaaacatcagctaaagagggtcttcttctgtggtgccagagg
aagactgctccttacaagaacgtcaacattcagaactttcacattagctggaaagatggg
ttgggattctgtgctctcattcacagacaccgtccagagctcattgactatggcaagcta
cgcaaggatgaccccatgaccaacctgaacacagcctttgacgtggcagagaagtacctg
gacattcccaagatgttggatgctgaggatatcgtgggcacggcccgcccggatgagaag
gccatcatgacctacgtatctagcttctaccacgccttctctggtgctcaaaaggcggag
acggcggccaataggatctgcaaggtgttggctgtcaaccaggagaatgagcagctgatg
gaggactacgagaagctggctagtgacctcctggagtggatccgtcgcaccatcccgtgg
ctggagaaccgtgccccagagaacaccatgctggctatgcagcagaagatggaggacttc
agggactatcggcgtcaacacaaacccccaaaggtccaggagaagtgccagctggagatc
aacttcaacaccctgcagaccaagctgaggctgagcaacaggcctgccttcatgccctct
gaggggaagatggtgtcggacgtctctaacgcgtggggcggcctggagggggcggagaag
ggttatgaggagtggctcctcaacgagatacgtcggctggagagactcgaccacctggct
gagaagtttcggcagaaagcagccacccacgaagcctggactgaaggtaaggaggagatg
ctgcaggcgcgggactttgagacggcctctctgtctgagatcaaggctctgctgaagaaa
cacgaggccttcgagagcgacctggccgcgcaccaggaccgcgtagagcagatagctgcc
atcgctcaggagttaaatgagctagactactatgactcccccagtgtgaacagtcgatgc
cagaggatatgtgaccgatgggacgccctaggagccctgacccagaaacgcagcgacgct
ctgcagagaactgagaagcttctggagaccatagaccagttgtatctggagtttgccaaa
cgagctgctccgttcaacaactggatggagggagccatggaggatctgcaggacaccttc
atagttcacaccatagaggagatacagggtctcagtacagcccacgagcagtttaaagcc
actctccctgatgcggataaggaacgcggtgccatcctgggaatccacaatgagatcgcc
aagatagtggccacctatcatgtgaacatggctggtaccaacccttacaccaccatcaac
cctcagggcatcaacgccaaatgggacaaggtgagacagctggttccccagagggaccag
gctctgatcgaagagcacgcccggcagcagaacaacgagcgtctccgcaggcagttcgcc
aaccaagccaacgtcatcgggccctggatccagaccaagatggaggagattggtcgcatc
tccatcgagatgcacggaaccctggaggatcagctgacccacctccgccaatacgagaag
aacattgtcaactacaagccaaagatcgaccaattggagggagaccaccaactgattcag
gaagctctcatcttcgacaacaagcacaccaactacaccatggagcatatccgtgtgggc
tgggagcagctcttgaccaccatcgccagaaccatcaacgagatcgagaaccagattctg
acgcgggatgccaagggcatcagccaggaccagatgaacgagttcagggcctccttcaac
cacttcgacagggaccactcgggcactctgggggctgaggagttcaaggcctgcctgatc
agtctgggcttcgatatcgccaacgatgcacagggtgaagcggagttctctcgcatcatg
agcatcgtggatcccaaccgggtgggcgtggtcacgttccaggcctttattgacttcatg
tcccgagagacggccgatactgacaccgctgaccaggtcatggcctccttcaaggtcctg
gctggggacaagaacttcatcatggctgatgagcttcgtcgtgagttgcctcctgatcag
gcagagtactgcatcgcccgcatggcgccctactccggcaccgacgccgtccccggcgcc
ctggactacatgtccttctccaccgcactctacggagagagtgacctctga
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