Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375471
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Entry
139375471 CDS
T10872
Name
(RefSeq) presenilin-1
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139375471
04330 Notch signaling pathway
139375471
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139375471
Peptidases and inhibitors [BR:
ocla01002
]
Aspartic peptidases
Family A22: presenilin family
139375471
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GFIT
Motif
Pfam:
Presenilin
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
139375471
NCBI-ProteinID:
XP_070973387
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Position
19:complement(62695355..62728717)
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AA seq
471 aa
AA seq
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MANNVEDIENNMVTEAPVPTQNQHPEPGVTGVRSRGGGGGTEQNGQAPPQRTPQVVESEE
DEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQNDGQRLIYTPFPEDTDTIG
QRALNSVLNATIMISVIIVMTMVLVLLYKYRCYRVIQGWLFLSSLLLLFFFSFIYLKEVF
KTYNVAMDWITLAVIVWNFGVVGMICIHWKGPLRLQQAYLIMISALMALVFIKYLPEWTA
WLILAVISVYDLLAVLCPKGPLRILVETAQERNEPIFPALIYSSTMVWLVNMADTGLGHR
PMTRKNSTEAPITQVESQSPALALGPAPLSPPEDDGGFTPNWMGHQEHQLGPLQSTDETR
REIQQLPSARPPVMDDDDEERGVKLGLGDFIFYSMLVGKASAAASGDWNTTLASFVAILI
GLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDQLALHQFYI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatgtggaggatatcgagaacaacatggtgactgaggctccagtaccaacc
cagaaccagcaccctgagcctggggtgacgggggtgcggtccaggggtggagggggtggg
acggaacagaacggacaggctcccccacaacgcaccccccaggtggtagagagtgaggaa
gacgaagatgaggagctgacgctgaagtacggggccaaacacgtcatcatgctgtttgtc
cctgtcacgctctgcatggtggtcgtcgtggcaaccatcaagtccgtcagcttctacacc
cagaacgatggacagaggctgatatacaccccattccccgaggacacagacacaataggg
cagcgagccctcaactcagtcctcaacgccaccatcatgatcagtgtcatcatagttatg
accatggtgctggtgctgctatacaagtaccgctgctacagggtgatccaaggctggctg
ttcctctcctctctactgctcctgttcttcttctccttcatatacctcaaagaagtgttc
aagacgtacaacgtggcgatggactggatcaccttggctgtgatcgtctggaacttcggc
gtggtagggatgatctgtatccactggaagggtcctctccgtctgcagcaggcctacctc
atcatgatctctgctctcatggctctggtcttcatcaagtaccttcctgagtggaccgcc
tggctcatcctggccgttatatctgtctatgatctgctagcagtgctctgccccaaaggt
cctctacgtatcctagtggagacagctcaggagaggaacgaacccatcttccctgctctc
atctactcctcgaccatggtgtggctggtcaacatggcagacactggcctcggacacaga
ccaatgaccaggaagaactcaacagaggctcccatcactcaggttgagagtcaatcccca
gccctggctctaggcccggcccctctcagccccccggaggatgacggagggttcacccct
aactggatggggcatcaggagcatcagctgggaccccttcagtccacagacgagacccga
cgggagatccaacaactcccctctgccagaccacccgtaatggacgatgatgacgaggag
aggggagtgaagctgggtctaggagacttcatcttctacagcatgctggtggggaaggcc
tctgctgcagctagtggagactggaacaccaccctggccagcttcgtagccatactcatc
ggcctgtgtttgactcttcttctcctggccatctttaagaaggccctccctgcccttccc
atctccatcttctttggcttggtgttctacttcgctacagacaacctggtcagaccattt
atggaccagctggctctgcaccagttctacatttag
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