Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375482
Help
Entry
139375482 CDS
T10872
Name
(RefSeq) attractin-like isoform X1
KO
K24332
attractin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Lectins [BR:
ocla04091
]
C-Type lectins
Others
139375482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139375482
NCBI-ProteinID:
XP_070973404
LinkDB
All DBs
Position
19:complement(64410136..64572124)
Genome browser
AA seq
1385 aa
AA seq
DB search
MDGAIRRPACILTSGLVEVGGRALMLQTLLIFSAFGLLLGLPAVTEAKECDKPCVNGQCN
TSTGNCVCSPGWVGDQCQHCGGRFRLTGPSGFLTDGPGNYKYKTKCTWLIEGTPNSILRL
SLDHFATECSWDHLYVYDGDSIYTPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFS
DAAYNLTGFNISYSVNTCPNNCSGRGECRVGNSTGAVYCDCESNWKGEACDIPYCLSDCG
WPDRGHCLQDTKTCRCQPGWQGPDCSLSVPANSSFWQREEYPEPGLARASHKAVVDQGIM
WVVGGYVFNSSDYQMITAYNLSSHRWLSLNRSVNSVMGRYGHSLALHEGKIYMYGGKIDS
TGNVTSQLWVFHIQNQTWVSLSAGAQEQWAVVGHSAHVVPPLLEGGSAVMLVLFGHCPLY
GYISQVQQYDIARNTWRAVVTDGALVQGGYGHSSVFDPSSRAIYIHGGYKAFSANKYGLS
GDLYKYDVDRSRWTVLKDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFM
AYDLACDEWSVLSRPDLHHDVNRFGHTAVYSDSVMYVFGGFNSLLLSDVLIYTPASCSSA
PSAAVCIAAWPGVHCVWNANLGSCLPWDSNPGFLDEQTTLASCGTRTYVDNDRCDQYTDC
YSCTANTNGCQWCAVQCVSVSSNCTAVTGAIVEYDVCPKDNPSYVCNKKTSCKSCGVDQN
CQWEPRNQECIALPENICGESWHLVGNSCLKFITAKDSYDNAKLTCRGHNAVLASLTNQK
KVDFVLKELQIMNVLVSKYKALVTPWVGLRKINVSYWCWEDMSPFTNTSLQWLPGEPSDA
GFCGYLAEPASSGLKAQTCINPVNGSLCERAANHSAKQCRTACAMRATCAECTSSSSECM
WCSNMRQCVDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLEQPGCGWCTDPSN
TGRGQCIEGSYRGPFQTAVPAPSTLPGPTSSPASQPALNISMCPYDTKYNWSFILCPACQ
CNGHSQCVNHSVCEKCEDLTTGLHCESCISGYYGDPTNGGSCQPCKCNGHAGVCNPNNGK
CFCTTKGIKGDRCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVA
TPEEQNRDLVVFINASKNFNLNITWAASFTAGTQTGEESPIISRSNIKEFKDSFSNENFD
FRNNPNITFFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIK
QSCWASRRREQLLREMQQMASRPFATINVALEMDEEPPDLIGGNVKTVPKPIAMEPCFGN
KAAVLSIFVRLPRGTGGIPPPGQSGLTVASALVDVSQQMCLGYKEKSCGLRNRKQPPSAQ
PSTCI
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgatacggcggccggcctgcatcctgactagcgggctggtggaggttggt
ggccgggccttgatgctccaaacactgctcattttctcggctttcgggctgctccttgga
ctgcccgctgtcaccgaggcgaaagaatgcgacaaaccgtgcgtgaatgggcaatgcaac
acgtctacgggcaactgtgtgtgcagccccggctgggtcggggaccaatgccaacactgc
ggaggaaggttcaggctgacgggtccctcagggttcctgacagacggaccagggaactac
aagtacaagaccaagtgcacctggctcattgagggaacgcccaacagcatcctcagactg
agtttggaccactttgctacagagtgcagctgggaccacctgtatgtgtacgatggggac
tctatctacactcctctactggctgccttcagtgggttgatagttcctgagcgctatggc
aacgagactgttccggaggtggtttcacagtctggttacgccctcctccacttcttcagc
gacgctgcttataacctgaccggcttcaacatctcatatagtgtgaacacgtgtcctaac
aactgttctggccgaggggagtgtcgcgttgggaactcaacaggtgctgtatattgtgac
tgtgaatccaattggaagggcgaggcctgtgatatcccttactgcctgtcagactgtggt
tggcctgacaggggacactgccttcaggacacaaagacatgtcgatgccagcctgggtgg
caaggtccagactgctctctgtccgtcccagccaactcctcgttctggcagcgggaggag
taccccgagccaggtctggccagggcttcccacaaggctgtagtggaccaggggatcatg
tgggtcgtcgggggttacgtcttcaactcctcagactaccagatgattacagcgtataac
ctcagctcccatcgctggctgtctctcaaccgctctgtcaactccgtcatgggacgatac
ggacactctctggcactacatgagggaaagatctacatgtacggaggaaagatagactct
actggcaacgtgaccagccagctgtgggtgttccacatccagaaccagacctgggtgtcc
ctctccgctggagcccaggaacagtgggccgtggtgggacactctgctcatgtagtgccc
cccctgctggagggaggtagtgcggtcatgctggtcctctttggacactgccctctatat
ggatacatcagccaggtgcagcagtatgacatcgctaggaacacgtggcgcgccgtggtt
accgatggagccctggtgcagggagggtacggccacagcagtgtgtttgacccctcctcc
cgagccatctacatccacggagggtacaaggccttcagcgctaacaagtacggcctgtct
ggagacctgtacaagtacgacgtggaccgcagccgatggacagttctaaaggacagcggg
ttcttccggtacctccacacggcggtcatcgttagcggaaccatgctggtgtttggagga
aacacgcacaacgacacgtccatgagccacggcgccaagtgcttctcctcggacttcatg
gcctatgacctggcatgtgatgagtggtcagtgctgtccagaccagacctccaccatgat
gtcaaccggttcggacacacggccgtctacagtgacagtgtgatgtatgtgtttgggggg
ttcaacagtctgttgttgagtgatgtcctgatctacacgccagccagctgctccagcgct
cccagcgctgccgtctgtatagcggcctggccgggggttcactgcgtttggaatgctaac
ttgggctcctgcctgccctgggactcgaaccccggattcctggatgagcagaccaccctg
gcctcctgtggaaccagaacatatgttgacaacgatcgttgtgaccagtacacggactgc
tacagctgtacagccaatactaacggctgccagtggtgtgctgttcagtgtgtctccgtg
agctccaactgtacggccgtcacgggggccatagtggagtatgatgtctgtcctaaagac
aacccgtcatatgtctgcaacaagaagaccagctgtaagagctgtggggtggaccagaac
tgccagtgggaacctcgaaaccaggagtgcatcgctctaccagagaatatttgtggtgag
agttggcacctggtgggtaactcgtgtctgaagttcatcacagctaaggactcgtacgac
aacgccaagctgacctgtcgtggtcacaacgccgtcctggcctcgttgaccaatcagaag
aaggtggacttcgtccttaaagagctgcagatcatgaacgttctggtgagcaagtacaag
gccttggtgacgccgtgggtggggctgaggaagatcaacgtctcctattggtgctgggaa
gacatgtcacccttcactaacacctctctccagtggttgccgggggaacccagcgacgcc
ggtttctgtggttacctagcagagccggcttccagcggtcttaaggcccagacctgcatc
aaccctgttaacgggagtctgtgtgaacgagcagccaatcacagtgccaagcagtgtcgg
acggcgtgcgccatgcgggctacgtgtgctgagtgtaccagcagtagctctgagtgtatg
tggtgcagcaacatgaggcagtgtgtggactctaatgcatacgtagcctccttccccttc
ggacagtgtatggagtggtacactatgaacagctgtccacctgagaactgttctgggtac
aggacgtgtggccagtgtctggagcagcctggctgtggctggtgtacggaccctagcaat
acagggcgtggccagtgcattgagggatcctatcgggggccattccagaccgcagtcccc
gccccctccaccctgcctggccccacctctagtcccgcctcccagccggctctcaacatc
agcatgtgtccttacgataccaagtacaactggagctttatactctgtccagcgtgccag
tgtaacggtcacagtcagtgtgtgaatcacagtgtgtgtgagaagtgtgaggacctgaca
acagggctccattgtgagagctgcatctctggttactatggagaccccaccaacgggggc
agctgccaaccgtgtaagtgtaatggccatgccggtgtgtgtaacccaaacaacgggaag
tgtttctgcaccaccaagggcatcaaaggagaccgctgtcacctgtgtgaggtggagaac
cgttaccaaggaaaccctctgaaaggaacatgttactacaccctgctgatagactaccag
ttcaccttcagtctgtctcaggaggacgaccgctactacaccgccatcaactttgtagca
acacctgaggagcagaatcgtgatctggttgttttcattaacgcctccaaaaacttcaac
ctcaacatcacctgggctgccagcttcacagcaggtactcagacaggcgaggagagccca
atcatctccaggagtaacattaaggagtttaaagacagtttctccaacgagaactttgac
ttccgcaacaacccaaacatcaccttctttgtctatgtcagcaacttcacctggcccatc
aagatacaaattgccttctctcagcacagtaacttcatggatctggtgcagttcttcgtc
acattcttcagctgcttcctttctctcctcctggtggcggcagtcgtctggaagatcaaa
cagagctgctgggcgtcacggcgacgagagcaactcctccgtgagatgcagcagatggct
agccggccgttcgccaccatcaatgttgccttggaaatggacgaggagccgccggaccta
attggtggaaacgtcaagacggtgcccaagcccatcgccatggagccgtgttttgggaac
aaggctgctgtcctctccatcttcgtccgtttacccagaggcaccgggggcatcccccca
cccggtcagtctggtctaacggtggcctcggccctggtggatgtgtctcagcagatgtgt
cttggttacaaggagaagtcatgtggtctgaggaacaggaagcaacccccctctgcacag
ccctccacctgtatctga
DBGET
integrated database retrieval system
