Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375590
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Entry
139375590 CDS
T10872
Name
(RefSeq) uncharacterized protein
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00240
Pyrimidine metabolism
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
139375590
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
139375590
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
139375590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Ysc84
Motif
Other DBs
NCBI-GeneID:
139375590
NCBI-ProteinID:
XP_070973483
LinkDB
All DBs
Position
2:87502691..87521149
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AA seq
711 aa
AA seq
DB search
MKLRYSELRLLKEVSAQLLKRDITTFHRRLCKNDGLFLVHPAVSQALAENRAVVALESTI
ITHGMPYPHNLSTAKAVEAIVRTEGAIPATVGLLQGRVHVGLSSEELDYLARSKTSLKVS
RRDLPYAISKGLCGGTTVSGTIIAAHRAGIHVFVTGGVGGVHRDGENSMDISADLTELGR
TPIAVVSAGVKSILDIGRTLEYLETQGVCVATFGTSMNFPAFFSPQSGFTSPYHVNNAEE
AADLIAGNLSLGLQSGLLLAVPIPKEHAAAGEQIENAIQAALAEANVEGIRGRDLTPFVL
QKVNELTRGKSLQANIALIHNNARVGSQIACALSKRMQKKTWTPAPHGKEREKDSDSQPN
IVVIGGVNVDFIAKGKTNKLVFGQTNPGSVCQSFGGVGKNLADSLSRMGQRPLFISAIGT
DSHSDAVLNYCRHMNTSGVAVLKEQRTATYCAVITESGDLSLGLGDMDIHQQITEQYVSQ
FEEKLSAASLMCLDGNIPVSTINYVCSVAKKHAVPVWYEPTDCDKACKPFLSDSWKALAY
TSPNLAELCTMNKALGLLTPAVLPSSVEEVLSCAMALARPLLDHLQCVVVTLGAMGVLLC
GEHNAGSVDLQPRRGTRKGRLCAVHYSALAQTAAEMVNVSGAGDSLAGGILAGMFQSRDT
HSCVRMGLLAARLSLASPHPVCITLTTDSVDPNKFQPPQSWPQPNLLWMEE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagatattctgagttgaggttgctgaaggaagtatctgcacaactcctaaaa
cgtgacatcacaacatttcacaggagattatgcaaaaatgatggtctcttccttgtccac
ccggcagtatcccaggcattggcagaaaacagagcagtggtggcactagagagcaccatc
atcacccatggcatgccatacccacacaacctgagcacagccaaagcggtagaagccata
gtaaggacagagggagccattcctgccactgttgggctgctccagggcagggttcatgtg
gggttgtcttcagaagaactggactacctagcacggagtaagacgtcgctgaaagtgtcc
cgccgagacctgccctatgccatcagcaagggtctctgtggtggcactacggtttcaggc
accataatagcagcacacagagccggtatccatgtctttgtcactgggggtgttggagga
gtgcaccgagatggagagaatagtatggatatcagtgcagatctgacagagctaggcagg
actcccattgctgtggtttcagctggagtgaagtccattctcgacattggccgcaccctg
gagtacttggagacacagggtgtgtgtgtcgccacatttgggacctccatgaatttcccc
gctttcttctctccacaaagtgggtttacctccccttaccatgtcaacaatgctgaggag
gctgctgatctcattgcgggtaacctgtccctgggtctacagagtggcctgctgctggct
gtgcccatccctaaggagcatgcagcagctggagaacagattgagaacgctatacaggct
gcactggcagaggctaatgttgaaggtatcagaggaagggatttgacgcccttcgttctt
caaaaggtcaacgaactgacccgaggaaagtccctccaggctaatatcgctctcattcat
aataatgccagggtaggcagtcagatagcctgtgcactgtctaaacgaatgcagaagaag
acttggacacctgctcctcacggaaaggagagagagaaagattcggactctcagccaaac
attgttgtcataggtggtgtgaatgtggattttattgccaaggggaaaacaaataagctg
gtgtttggacagacgaatcctggaagtgtctgccagtcatttggtggagtaggaaagaac
cttgctgactctctgagcagaatgggccaaagacctctcttcatctcagctattggaact
gactctcacagtgatgctgtgctgaactactgtcggcacatgaacaccagtggtgttgct
gtgcttaaggagcagcggactgccacgtattgtgccgtaatcactgagagcggggatctg
agtctgggattaggcgacatggacattcaccagcaaatcacagagcagtatgtgtcccag
tttgaggagaagctctcagcagcctctctcatgtgtctggacggcaatatacccgtctcc
accatcaactatgtttgctctgtcgccaagaagcatgcagtgccagtgtggtatgagcca
actgattgtgacaaggcctgcaagcctttcctgtcagacagctggaaagccctggcctac
acctcccccaacctggctgagctgtgtaccatgaacaaggcattgggcctcctgacacct
gcagtgctgcctagctctgtggaagaagtgctgagctgtgccatggctctcgcacgcccc
ctgctggaccacctgcagtgtgtggtggtgaccctgggggccatgggagtgctgctgtgt
ggagaacataacgctgggtctgtagacctgcagcctaggcgaggaacaaggaagggtcgg
ctatgtgccgtccactactctgctctggctcagaccgcagccgaaatggtgaatgtctca
ggagccggagatagtcttgcaggtgggatattggctggtatgttccagagcagagacact
cacagctgtgttaggatggggctcctggcagcacgcctgtcactggcctccccacatccc
gtctgcatcactctgaccacagactctgtggacccaaacaagttccaaccaccccaatcg
tggcctcaacccaacctcctgtggatggaggaatga
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