Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375693
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Entry
139375693 CDS
T10872
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139375693
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139375693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH_5
PH
PH_13
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
139375693
NCBI-ProteinID:
XP_070973606
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Position
2:87791987..87803741
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AA seq
611 aa
AA seq
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MEESEVGELSVEDEPKRRRISSKRTSTVNSETSPATVNNSKKPPLCRGSSFTFLTPGTPW
DFSLKRKHKEPKDDDTVSLSSFDLKVKRKRKEKKEDDDTVSLSSFDLKEPSNKRVRPLSR
VSSLANLISPSKNGAVRRFGQTIQNMSLRGDSKSPGTSLKSCSKAAGPTPPKRRNSTLWS
ETLDVHQKSTFSTKEIKRQEAIHELSRGEQDLIEDLQMARKAYHDPMLKLSIMTEEELTH
IFGDLDSYIPLHEDLLDKLAKGTGPNGTVGQIGQIVVDWLPGLNAYRDYCSNQLAAKALL
DQKKQDRKVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLREILRHTPPDHPDVP
CLEKAIAIIQGVLSDINMRKGESESQYYINKLEYLDDRQRDPLIDNCKTLLCHGELRNKS
GSKLHVFLFSELLVLTRPVTRHERSCYQVYRQPLPIRDLALEDLQDGDVRMGGSFRGAFS
QGEKAKNVFRVTSLDPTHGQSHTLQVNDVFHKQQWLNCLRSAIDAQPQQQRAPLRDQHSE
ATTMTRAKRRSSVVSMSDMVGEGADENVWHQVGEPILGCKGTETLPASGSSSRIKREWSR
GTHRRRKETGV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcagaggtgggcgaattatctgtggaagacgagccgaagagacgaaggatt
tcctcgaagagaacgtccacggtcaactcagaaacctcccccgccactgtcaacaactcc
aaaaaacctccactgtgccgagggagttccttcacctttctgactccaggaacaccatgg
gacttcagtctgaagaggaaacacaaagagcccaaggatgatgacactgtcagtctgtcc
agctttgacctcaaagtaaagagaaaacgcaaagagaaaaaggaggatgacgacaccgtc
agtctgtccagttttgacctcaaagagcccagtaacaagcgtgtgcgaccactgagccgg
gtgtcatctctggctaacctgatctccccttccaagaatggagccgtccgacgctttggt
caaaccatccagaacatgtcgctgcggggtgacagcaagtcgccggggacgtccctgaag
tcgtgcagtaaggcagcgggcccaacacctcccaaacgtaggaacagcactctgtggtct
gaaacactggacgttcaccagaagagcaccttctccaccaaagagattaagagacaggag
gccattcatgagctgtccagaggagaacaagaccttattgaagacctccaaatggcacga
aaggcatatcatgatcccatgctgaagctttccatcatgacagaggaggagctaactcat
atatttggagatctggattcttacattccacttcatgaagacttgttggataagcttgca
aagggcaccggtcctaatggaacagttggtcagattggacagatcgtcgtggactggttg
ccaggtctgaatgcgtacagagactattgcagtaaccagctggctgccaaggccctgttg
gaccagaagaagcaggaccggaaggtgcaggacttcctgcagcgctgcctggagtctccc
ttcagtaggaagctggacctgtggagcttcctggatatccccaggagccgtctggtgaaa
tatcccctactgctgagagagatactgagacatacaccaccagatcaccctgacgttccc
tgtctggagaaggcgatagccatcatccagggtgtgctgtctgacatcaacatgaggaaa
ggagagtcagagagtcagtactacattaataagctggagtatctggacgacaggcagaga
gacccgctcatcgacaactgcaagaccttgttgtgtcacggagagctacgcaacaagagt
ggctcgaaactgcacgtgttcctgttctctgagctgctggtgctgacgaggccggtgaca
cgtcacgagcggagctgctaccaggtgtaccgtcagcccctccccatcagagacttggct
ctggaggacctgcaggatggagacgtacgcatgggagggtcattcagaggggccttcagc
cagggggagaaagctaagaacgtgttccgcgtgacctccctggacccgacccacggccag
tctcacactctgcaggtcaacgacgtcttccacaagcagcagtggctcaactgtctccgc
agcgccatcgacgcccaacctcaacagcagagggcgccactcagagatcagcacagtgag
gctacaaccatgaccagggccaagcgtcgttcttctgtggtgtccatgtctgatatggtg
ggggaaggggcagatgagaacgtctggcaccaggtcggtgagccaatccttgggtgtaaa
ggcacagagacactccccgcgtctggttcttcaagtagaatcaaaagagagtggagccgt
ggtacgcatcgcaggaggaaagagaccggggtttag
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