Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375733
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Entry
139375733 CDS
T10872
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139375733
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139375733
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GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
Ig_VEGFR-1-like_5th
LRR_14
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
139375733
NCBI-ProteinID:
XP_070973649
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All DBs
Position
20:84294271..84298948
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AA seq
660 aa
AA seq
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MFRGFSLGFCLTLFCFGPFVCSACPSQCNCFFHKLSDGSKARSVLCNDPQITLIPPNFPA
DTSKLRIEKTAIAKISSETFHYLNSLEFLWMSFNSLNSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNNLATVPPEVLSMWL
SVKPSQEDGDSSKYILGLHDNPWLCDCRLYDLVQFQKSPSSSVVLIDTKLRCADPESLSG
VLFSETELQRCQGPHVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
EEVSKEGIIWSILSVPAVSYRDSGKYMCKATNFVGTADAIISLVITDSFKNEEQGGSSKT
RNQRGRKTGGFGKAAYQKKLVARYIPPPTTTAAMPIIEPLGPSGFTGRYDIESYSILDSV
ADGQTPGPPATEPAIIKEVEKEVLSNLAANASSLQASAPPERRVVRSVKVIGDTDHTVSL
NWRAPTAKNTTEFSVLYAVFGERDMRRINVGVGKNRITIDGLVPRTKYIACVCVKGLIPK
KEQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRCKKLLGRKSKD
IQDSYVTFETLSPGQKPKGMEGEYLARQHPDESNRLLSARSSVDSGATCRNEGPPSEYFC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaggttttagcctgggtttctgcttgacattattttgcttcggaccgtttgtt
tgcagcgcgtgtccgtctcaatgtaactgcttctttcacaaattatcagacggatccaaa
gcaaggagtgtcctttgcaatgacccacagattactctgatcccacccaactttcctgca
gacacctcgaaactgcggatcgagaagactgccatcgcaaagatctccagcgaaaccttt
cactacctcaacagtttggaatttctctggatgtctttcaattctctgaactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgcactc
acctctttcccctgggaatctctgactgatatgcccgacctgaggctactggacctacat
aacaataagatatcgtcgatcccggccgaggcgaccatttatatcaagaacctgacctac
ctggacttatctagcaacaacctggccaccgtacctcctgaggttctctctatgtggtta
tctgtgaaaccgtctcaagaagatggggacagttccaaatatattctaggtctccatgac
aacccatggctatgtgactgccggctctatgacctggtccagttccagaagtctccgtca
tcctctgtggttctgatcgacaccaagctgcgctgtgctgacccggagagcctgtcgggg
gtgctgttcagcgagacggagctccagaggtgtcaggggccccatgtccacacagctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctacgttgtgggactatcggagtc
ccagtaccagagctgtcctggacccgggcagacggcaaacagatgaacggcactgttcag
gaagaagtttcaaaggagggaatcatttggtccatcctgagtgtgcctgccgtctcttac
cgggactctgggaaatacatgtgcaaagcgaccaactttgtggggactgcagatgccatc
atctccctggttattacagactcctttaaaaatgaggaacaaggtggcagctccaagact
agaaaccaaagaggacggaaaaccggtggatttgggaaagctgcctaccagaagaaactt
gttgccagatacatacctccaccaaccacgacggcagctatgcccatcatcgagccactc
ggaccgagtggtttcacagggaggtatgatatcgagagctacagtattttggatagtgtg
gccgatggacagacgcccggtcctcctgccacggagccggcgattattaaggaagtggag
aaggaggttcttagcaacctggcagccaacgcctcttctttgcaggcatcggcgccgccg
gagagacgggtggtacgatcggtgaaggtcatcggggacaccgatcacaccgtctccctg
aactggcgggccccgacggccaagaacaccaccgagttcagcgtcctgtatgccgttttc
ggcgagagggacatgcggaggatcaacgtaggcgtgggaaagaaccgtatcaccatcgac
ggccttgtgccaaggacaaagtacatcgcctgcgtctgcgtcaaaggcctgatccctaaa
aaggagcagtgtgtaatcttctcaacggacgaggcggccagcgcaagcggcacccagaag
ctcattaacgtggtggtgatcaccgtggcctgcgtgatcgctgtccccctgacactgatc
gtctgctgtggggcgctcaagaagcgctgtaaaaagctactggggaggaaatccaaagat
attcaagactcatatgtaacattcgagaccctctccccaggacagaagcctaaggggatg
gagggggagtaccttgccaggcaacacccagacgagtccaacagactgctctctgctaga
tccagtgtggactctggggctacttgtaggaatgagggaccccctagtgagtacttttgt
tga
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