Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375791
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Entry
139375791 CDS
T10872
Name
(RefSeq) zinc finger FYVE domain-containing protein 9-like
KO
K04679
MAD, mothers against decapentaplegic interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139375791
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139375791
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139375791
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139375791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SARA_C
FYVE
SARA
Motif
Other DBs
NCBI-GeneID:
139375791
NCBI-ProteinID:
XP_070973754
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All DBs
Position
20:3050370..3096796
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AA seq
1202 aa
AA seq
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MENHFQTEAFNLDKVLDDFEQKQDETDSPSLSDKWIQILAPPAHLLSPNRALALTPDLGP
LPLKTPLPPDLSSSNPQGTNAKCHPTAEPPPWGELPDCRADVRSPSLPQPNIGKLFGGEG
SSASSSSPPYHHHSSISPSSPASPALNGLGEDPCKGNQTSPLDHHQPPTPSDPRTDAPVG
ERGDGSSHVSHTHLTIEERLGGVEAIAEKFNSKPETERPGAWPPIQDSGREEAGLAGVQS
HEEGIPKRESHGNTVKNGLMEGPTERKECRNSSQKQTRLIGEMEKESTGGQDGEMVLTSG
MATEDRGSREEEEEDRGSREEGQSLPPHSKEDSVKEEKEMEESNLENGGGDSSVASILNT
RLQLVSVPFGGARPKQPVTLKLQIPWPLSGQDQNQLSPTVNTTTTAVCKNKNFENRAGDI
TMDTGTVVAGGDPGGCVEVVNESSSLGLVLESESSPDNDLQAGCHHRGALPRKQLSSLGD
VAPVWVPDSKAPVCMKCEIRFTFTKRRHHCRACGKVFCAACCSLRSRLIYMDRKEARVCI
TCHSALLSAHSWGGMCGGSNQSPNPNNPAEYCSTIPPLQQIRSEGSTGFHPRERRRVRFA
DGILPNGEAVESPKLPATSPAPSQTLAVSQCSNKSFTSDLREALSPAPASTVGSPVGSSI
SLIPEDGLPPILISTGVKGGVRGHSTASPPSDYTVEERPSEMVLIQQLEEGGPDPLVFVL
NANLLAMVKLVNYVNRKCWYVTTKGMHAVGQAEVVVLLQCLPDEKSIPKDLFSHFVQLYQ
EALTGNVLTHLGHSFFTQSFLGSREHGGFLYVSPSFQSLQDLMLPNPPYLFGVLLQKWET
PWAKMFPIRLMLRLGAEYRFYPCPLFSVRFRKPLFGEAGHTIMTLLVDFRNYQYTLPTVK
GLVVDMEVKKTCIKIPSNRYNELMKAMNKSNEHVLAMGACFNELADSHLVCIQNDDGNYQ
TQAISIHHQPRKVTGACFFVFSGSLKASSGYLAKTSIVEDGVMVQITAETMDALRQALRD
MKDFSITCGWADQEYSQEHVHIQWIDDDHNFFNKGVISPIDGKSMEFITSVKIFHGSEFK
ANGKVIRWTEVFFLQSEDQPNGLSDPADHSRLTENVARAFCVALCPHLKLLKEEGMAKLG
LRVTLESDQVGYLAGSNGQPLLSHYLRDLDSTLIPVIHRGACQLSEGPVVMELVFYILEI
LS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccacttccagacagaggccttcaacctggataaagtgttggatgactttgaa
cagaagcaagatgagaccgacagtcccagtctgtctgataagtggattcagatcctggcc
cctcctgcccacctactatctccgaaccgtgccctggctttgaccccagacctcggcccc
ctccccttaaagacccccctgccccctgacctgtcatccagcaacccccaggggaccaac
gctaaatgccaccccaccgccgagcccccaccctggggagaactaccagactgccgtgca
gacgtgcggagcccttcgctcccccagcccaacatcggcaagctgtttgggggtgagggc
tcgtcggcctcctctagctcccctccgtaccaccaccactcctctatcagcccctctagt
ccagccagccctgccctcaacgggctcggtgaagatccctgcaaggggaaccagacatcc
cctttagaccaccaccagccccccacaccctcagacccacgtactgatgcccctgtgggg
gagaggggtgacgggagctcccacgttagtcacacacacttgaccattgaggagaggctg
ggaggggttgaggcgatagcagagaagtttaactccaagccagagaccgagagacctggt
gcttggcctcctattcaggacagtggtagggaggaggctggactggctggggtacagtca
catgaggaaggaatccctaagagggaaagtcatggaaatactgttaaaaatggattgatg
gagggaccgacagagcggaaggagtgtaggaattcctctcagaagcagacgaggttgata
ggagaaatggagaaggagagcacgggaggtcaggatggagagatggttcttaccagcggc
atggctactgaggaccgagggagcagggaggaggaagaggaggaccgagggagcagggag
gagggccagtctctcccccctcactccaaggaggactccgtaaaagaggagaaggagatg
gaggagagcaacctagagaacggaggaggagatagcagtgttgcctccatactgaacact
cgtctgcagctggtaagtgttccgttcggtggagcacgtcccaaacaaccggtcactctc
aaactccagatcccctggccgctatccggacaggaccagaaccaactatcacctaccgtt
aacaccaccaccaccgccgtctgcaagaacaagaactttgagaaccgtgccggtgacata
accatggatactggaaccgtcgttgccgggggtgaccctggtggttgtgtcgaggttgtt
aacgagtcgtcatcgttgggcctggtgctggagtccgagagcagcccggacaatgacctc
caggctgggtgtcaccaccggggtgctctgcccaggaaacagctctcctccctgggggat
gtggcccccgtgtgggtccctgactccaaggcaccagtctgtatgaagtgtgagatccgc
ttcaccttcaccaagaggaggcatcactgcagggcctgcggaaaggtgttctgtgctgcc
tgctgcagcctgaggagcagactgatttacatggacaggaaggaggccagagtctgtatc
acctgtcactctgccctactgagtgctcattcgtgggggggtatgtgtggtgggtctaac
cagagccctaaccccaacaacccagcagagtactgcagtaccatcccacctctgcagcag
atccgctcagaggggtccacaggtttccacccacgggagcggaggagggtgcggtttgca
gatggaatcctgcccaatggggaagcagtggaatcccccaagctccctgctaccagcccc
gccccctcgcaaacattggccgtctcacagtgttccaacaaatccttcacttctgatttg
cgagaggcgttgtcccctgcccctgcgtccaccgtgggaagccctgtaggcagctccatc
agtctaattccggaggacggacttcctcccatcctcatctcaaccggagttaaaggaggt
gtgaggggacacagcacagcatcaccaccctcagactatacggtggaggagcgtccctct
gagatggttctgatacagcagctggaggagggaggtcctgaccccttggtgtttgtgctt
aacgctaacctgctggctatggtcaaactggtcaactacgtaaacaggaagtgttggtat
gtgaccactaaggggatgcatgcagtgggccaggctgaggtggtggtgctgctgcagtgt
ctacctgacgagaagagcatccctaaagacctcttcagccactttgtacagctctaccag
gaggccctcacaggtaatgtcctgacccacctgggccattcgttcttcacccagagtttc
ctgggcagcagggagcatggagggttcctctacgtctccccgtccttccagtccctccag
gacctgatgctccccaaccccccctacctgtttggggtgttgctgcagaagtgggagacc
ccctgggccaagatgttccccatcagactcatgctgcggctgggcgccgagtacagattc
tacccctgccctctgttcagcgtgcggttcagaaaacccctgtttggagaagcaggtcac
accatcatgaccctgctagtggacttccgtaactaccagtacacgttgcccacggtgaag
ggtctggtggtggacatggaggtgaagaagacctgcatcaagatccccagcaaccgatac
aacgagctgatgaaggcgatgaacaagtccaatgaacacgtcctggccatgggggcgtgt
tttaacgagctggccgattcccacctggtgtgtattcagaacgacgacggaaactaccag
acacaggccatcagtatccaccaccaaccgcgcaaagtgactggcgcctgcttcttcgtg
ttcagtggttctctgaaggcatcttctggatacctggccaagaccagcattgtggaggat
ggtgtgatggtgcagatcacagcagagaccatggatgctctacggcaagccctcagggac
atgaaggactttagtatcacctgtggctgggcagaccaggagtacagccaggaacacgtt
cacatacagtggatagatgacgatcacaactttttcaataagggggtaattagtcctatt
gatgggaagtctatggagttcatcaccagcgtgaaaatcttccacggttcagagttcaag
gctaatgggaaggtcatccgctggacagaggtgttcttcctacagagtgaggaccagccc
aacggtctgagtgaccctgctgaccacagtcgcctgacggagaacgtggcgagggcattc
tgcgtggcgctctgcccacacctcaaactgctgaaggaggaaggcatggctaagctgggc
ctacgggtcaccctcgagtctgaccaggtgggttacctagcaggaagtaacggccagcct
ctcctctcccattacctgagggacctggacagtactctgatccctgtcatccacagaggg
gcgtgtcaactcagcgagggacctgtcgtcatggagctggtcttctacatcctggaaatc
ctctcctag
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