Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139375809
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Entry
139375809 CDS
T10872
Name
(RefSeq) ATP-binding cassette sub-family F member 2-like isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139375809
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
139375809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_28
Rib_recp_KP_reg
XRCC4_CC
NACHT
VapE-like_dom
AAA_33
AAA_23
Dynamin_N
Hac8_like_N
Motif
Other DBs
NCBI-GeneID:
139375809
NCBI-ProteinID:
XP_070973783
LinkDB
All DBs
Position
20:7122454..7134475
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AA seq
662 aa
AA seq
DB search
MGQGHPGRLNPPLTRTTLGQLCAASWDSWPAATHPGIKPGLNFFPSRSSAAMPSDLAKKK
AQKKKEAAKSRQKAKKPGEDGEGEIPEQGQQNGAESNGVDMLTKEMDEFELKKTEARAVT
GVLASHPNSTDVHVASLSLTFHGQELLQDTSLELNSGRRYGLIGLNGTGKSMLLSAIGHR
EIPIPEHIDIYHLTREMAPSDKTALQCVMEVDAERIHLEKEAERLASEDSECEKLMELYE
RLEELDADKAEVRASQILHGLGFTAAMQQKKLKDFSGGWRMRVALARALFLKPFMLLLDE
PTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIMHLHERKLKYYTGNYDQYI
KTREELEENQMKRFNWEQDQIKHMKNYIARFGHGSAKLARQAQSKEKTLQKMVASGLTES
VSNDKTLSFCFPPCGKIPPPVIMVQNVSFKYSDDQPHIYKNLEFGIDLDTRVALVGPNGA
GKSTLLKLLTGELLPTDGMIRKNSHVKIGRYHQHLTEQLELDLSPLDYMMKCYPEIKERE
EMRKIIGRYGLTGKQQVNPIRNLSDGQKCRVCFAWLAGQNAHMLFLDEPTNHLDIETIDA
LADAINEYEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKHHLKKKIDKNSH
GV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaggacatcccggccggctaaaccctcccctaacccggacgacactgggccaa
ttgtgtgccgcctcatgggactcgtggccagctgcgacacatcctgggatcaaacccggg
ttgaatttttttccctcgaggtcctcagcagccatgccctccgacctggccaagaagaag
gcgcagaagaagaaggaagccgccaaatcccgacagaaggccaaaaaaccaggagaggac
ggagagggagagataccagagcaaggccagcagaatggagcagaaagcaacggagtggat
atgctgaccaaggagatggacgagtttgagctgaagaaaacagaggcgcgggctgtaacc
ggcgtcctggcgtcgcaccccaacagcacggacgtccacgtcgccagcttgtcgctcacc
ttccacgggcaagagctgttgcaggacaccagcctggagctcaactcgggccggcgctat
ggcctcattggcctcaacggcactggtaaatccatgttgctgtcagccattggccaccgc
gagatacctatcccagagcacattgacatctaccacctgacccgtgagatggcgcccagc
gacaagacggccctgcagtgtgtcatggaggtggacgcggagaggatccatctggagaag
gaggccgagcgcctggcctccgaggactctgagtgtgagaagctgatggagctgtacgag
cgtctggaggagctggacgcagacaaggccgaggtgcgggcctcccagatcctccacggc
ctgggctttactgccgccatgcagcagaagaagcttaaggatttcagcggaggctggagg
atgcgtgtcgctctggccagagccttgttcttgaagcccttcatgttgctgctggatgag
cccaccaaccacttggacttggatgcctgtgtgtggctggaggaagagcttagccaattt
aaacgtattttggtcctgatttcccattcgcaagacttccttaacggcgtgtgcaccaac
atcatgcacttacacgagcgcaagctgaaatactacacgggcaactatgatcagtacata
aagaccagggaggagctggaagagaaccagatgaagagattcaactgggagcaggaccag
atcaaacacatgaagaactacatagcccggtttgggcacggctcagccaagctggctcgc
caagcccagagtaaagagaaaaccctgcagaagatggtggcctctggcctgactgagagc
gtttccaatgacaaaaccctgtcattttgttttcctccctgtgggaagattccccctccg
gtcatcatggtacagaatgtcagcttcaagtactccgatgaccagccccatatatacaag
aaccttgagttcggcatagacctcgacacccgagtggcccttgtggggcccaacggggcc
gggaaatccacattgctcaaacttctcactggagagctcctccctactgacggtatgatc
cgcaagaactcccacgtcaagattggcagatatcaccagcatctaactgagcagctggaa
ctcgacctctcgcccctggactacatgatgaagtgttacccagagatcaaggagagggag
gagatgaggaagatcattggccgttatgggctgacgggcaaacagcaggtgaaccccatc
cggaacctgtctgatgggcagaagtgccgggtgtgcttcgcctggctggctggtcagaat
gcccacatgctcttcctggatgagcccaccaatcacttggacatcgagaccattgacgcc
ctggccgacgccatcaacgagtatgagggcggcatgatgttggttagccacgacttcagg
ctcatccagcaggtggcccaggagatctgggtttgtgaaaagcagacgatcaccaaatgg
aaccgggacatcttggcttacaaacaccatctgaaaaagaagattgacaaaaattcgcac
ggtgtataa
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